Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2202 ATGGCGTCGGTTTCTTGCAACTTATTCTTCTCCGTTCGATCGGAGAGAGCCTCTCTCTCCGCCTCTTTCTCCTCTTCCTCCTCCTTCGCTCCCTTCCTCCGCCGTCAATGCCTCCTCTCTCCGCCGCCGTCTCCGATCAAAATATCTTGCAATGCTTCTTCCGCCGTTTCCACCGAATCTTCTTCTCTCACTGCAAAAACTGAGCTGAAAGATTTTCTTCACATAAATGACTTTGATAAGGACACTATTTTGAAGATCTTAGATCGAGCCATTGAGGTCAAGGCATTATTAAAATCGGGGGACAGGACATTTCAACCATTTAAAGGGAAGACAATGGCAATGATCTTTGCAAAGCCATCCATGAGAACTCGTGTTTCATTTGAGACTGGATTTTCATTGTTAGGTGGCCATGCTATATATTTAGGACCTAATGATATCCAAATGGGCAAGCGAGAGGAGACTCGTGATGTTGCTCGCGTCTTGTCTCGCTATAATGACATCATTATGGCTCGTCTTTTCGCTCATCAGGACATACTTGATCTTGCCAAGTATGCAACTGTGCCAATCATCAATGGATTGACAGACTATAATCATCCGTGTCAAATAATGGCTGATGCTCTCACTATAATTGAACACCTTGGTCAGTTGGAAGGCACCAAGGTTGTCTATGTTGGAGATGGGAATAATGTTGTCCATTCATGGCTGCTGTTGGCAGCTGTAGTTCCTTTTCACTTTGTTTGTGCCTGTCCAAAGGGTTTTGAACCTGATGAGAAAACAGTTGAGAAGGCACGGCAGGCTGGAATCAGCAAAATTGAGATAACTAATGATCCGAAAGAAGCTGTCAGAGGAGCTGACATTGTTTATTCAGATGTCTGGGCCAGCATGGGCCAAAAGGAAGAGGCTGCATACCGCCGCCAAGTGTTTAAAGGGTTTCAGGTGGACCGAAATCTTATGGATATAGCTGGCCCAAAAGCATTGTTCATGCATTGCTTACCAGCAGAAAGAGGGGTGGAGGTGACTGACGAAGTTATTGAAGCTCCAAATTCTATTGTCTTTCCACAAGCTGAGAATCGATTACATGCACAGAATGCCATAATGCTCCATGTGCTTGGCAAGTAA 1119 0.4486 MASVSCNLFFSVRSERASLSASFSSSSSFAPFLRRQCLLSPPPSPIKISCNASSAVSTESSSLTAKTELKDFLHINDFDKDTILKILDRAIEVKALLKSGDRTFQPFKGKTMAMIFAKPSMRTRVSFETGFSLLGGHAIYLGPNDIQMGKREETRDVARVLSRYNDIIMARLFAHQDILDLAKYATVPIINGLTDYNHPCQIMADALTIIEHLGQLEGTKVVYVGDGNNVVHSWLLLAAVVPFHFVCACPKGFEPDEKTVEKARQAGISKIEITNDPKEAVRGADIVYSDVWASMGQKEEAAYRRQVFKGFQVDRNLMDIAGPKALFMHCLPAERGVEVTDEVIEAPNSIVFPQAENRLHAQNAIMLHVLGK* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2202 372 PRINTS Ornithine carbamoyltransferase signature 287 297 IPR002292 GO:0016743
Dod08g2202 372 PRINTS Ornithine carbamoyltransferase signature 349 360 IPR002292 GO:0016743
Dod08g2202 372 PRINTS Ornithine carbamoyltransferase signature 147 160 IPR002292 GO:0016743
Dod08g2202 372 PRINTS Ornithine carbamoyltransferase signature 187 201 IPR002292 GO:0016743
Dod08g2202 372 PRINTS Ornithine carbamoyltransferase signature 114 128 IPR002292 GO:0016743
Dod08g2202 372 PANTHER ORNITHINE CARBAMOYLTRANSFERASE, CHLOROPLASTIC-LIKE 16 371 - -
Dod08g2202 372 Hamap Ornithine carbamoyltransferase, catabolic [argI]. 69 371 IPR024904 GO:0004585|GO:0006591
Dod08g2202 372 Gene3D Aspartate/ornithine carbamoyltransferase 201 357 IPR036901 GO:0006520|GO:0016597|GO:0016743
Dod08g2202 372 SUPERFAMILY Aspartate/ornithine carbamoyltransferase 69 371 IPR036901 GO:0006520|GO:0016597|GO:0016743
Dod08g2202 372 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 116 135 IPR006130 GO:0006520|GO:0016597|GO:0016743
Dod08g2202 372 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 198 209 IPR006130 GO:0006520|GO:0016597|GO:0016743
Dod08g2202 372 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 335 358 IPR006130 GO:0006520|GO:0016597|GO:0016743
Dod08g2202 372 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 323 332 IPR006130 GO:0006520|GO:0016597|GO:0016743
Dod08g2202 372 Gene3D Aspartate/ornithine carbamoyltransferase 72 366 IPR036901 GO:0006520|GO:0016597|GO:0016743
Dod08g2202 372 TIGRFAM orni_carb_tr: ornithine carbamoyltransferase 70 370 IPR002292 GO:0016743
Dod08g2202 372 Pfam Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 217 368 IPR006131 GO:0006520|GO:0016597|GO:0016743
Dod08g2202 372 Pfam Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 70 211 IPR006132 GO:0006520|GO:0016743
Dod08g2202 372 PANTHER ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL 16 371 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g2202 K00611 - vvi:100243725 578.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2202 08 49729049 49734025 Dod08g2202 08 49729049 49734025 ECH