Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2197 ATGCATGCATCATTATGTTTTTATTTTTTATATTTTAATTTTGGAAGGTTTATTCAATGGCTTCTCCAATTGATGTTGATGAGACAATGTCATCTGGTACACATCCCCCTGGGCCTAGAGAAAGCAGTGGACAAGGAGTCACACCTTAGTTTGTCTAGGCATCGAACTCTGATGAACATACATAACAAAGCTCCTGTTGTTGACAAAGATGCATTTGTTGCCCCAAGTGCCTCCATCATTGGTGATGTCAAAATTGGAAGAGGATCGTCAATTTGGTACGGATGTGTTCTGAGAGGCGATGTGAACAACATCCGTGTTGGAAGTGAAACTAACATACAGGATAACTCCCTGGTGCATGTTGCAAAGTCAAATTTAACTGGGAAGATGGTGCCTACGATTATCGGGGATAAGGTTACTATAGGTCATAGTTCCGTTTTACATGGTTGCACTATTGAGGATGAGTGTTTTATTGGTATGGGTGCAATACTACTTGATGGTGTTGTGGTTCAGAAAAATGCCATGGTTGCTGCTGGAGCTCTTGTGAGACAGAATACAAGGATTTCAAGTGGGGAGGTATGGGCAGGCAATCCGGCAAGGTTCCTGAGAAAGCTCACTGAACAAGAGATAGCATTTTTCTCTCAAACTGCCACCGCTTACTCTAACCTTGCAAAAGTGCATGCAGCAGAAAACGCAAAGCCATTTGATGAAGTTGAGTTTGAGAAGGTGCTCCGAAAGAAGTTTGCACGTAAGGATGAGGAGTATGACTCGATGCTTGGTGTTGTCCGCGAGACCCCTCCGGAGCTTGTTCTTCCTGATGATATCCTACCAAAGAAACCAGTTTTTAAAAATATATAA 855 0.4246 MHASLCFYFLYFNFGRFIQWLLQLMLMRQCHLVHIPLGLEKAVDKESHLSLSRHRTLMNIHNKAPVVDKDAFVAPSASIIGDVKIGRGSSIWYGCVLRGDVNNIRVGSETNIQDNSLVHVAKSNLTGKMVPTIIGDKVTIGHSSVLHGCTIEDECFIGMGAILLDGVVVQKNAMVAAGALVRQNTRISSGEVWAGNPARFLRKLTEQEIAFFSQTATAYSNLAKVHAAENAKPFDEVEFEKVLRKKFARKDEEYDSMLGVVRETPPELVLPDDILPKKPVFKNI* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2197 284 SUPERFAMILY Trimeric LpxA-like enzymes 60 224 IPR011004 -
Dod08g2197 284 CDD LbH_gamma_CA_like 66 224 - -
Dod08g2197 284 Gene3D Hexapeptide repeat proteins 55 234 - -
Dod08g2197 284 PANTHER DYNACTIN SUBUNIT P25 50 278 - -
Dod08g2197 284 Pfam Hexapeptide repeat of succinyl-transferase 150 181 IPR001451 -
Dod08g2197 284 PANTHER GAMMA CARBONIC ANHYDRASE 1, MITOCHONDRIAL 50 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2197 Dod-Chr8 49676837 49683844 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g2197 133 232 Miscellaneous Gene Families AT2G17640 31.783 3.70e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g2197 K01726 - mnt:21392362 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2197 08 49676837 49683844 Dod08g2197 08 49676837 49683844 ECH