Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2180 ATGCATGCAACTGACGAAGGCTCATCGAGCGTTTCTGGCAGTGGTCGTCCTCCCAAACGGCCACGAACAATGGCATCATCATCTCTTGATTCCGAAAGTCCAAAAACTAATTTTCGCAGGACGATCTTCTGCAATCGGCCACTGAATATGAAGCACATTGCTGCCGTGGGATTCAACCTGGATTATACTCTGGCACAATACTACCGTGATGCTTTTGAATCTCTCGCTTATAAGAGCGCAGTTAGAAAGCTGGTTTACGATTTAAATTACCCTGGCGAGTTGCTGACTTGGAAATTTGCACCTTATTACTTCATCAGAGGCCTTGTTCTTGACATAAAGAGAGGCAACATCCTGAAGATGGATCGCCACAAGTATGTGAAAGTTGCCCATCATGGATTTAAAGAGATGTCAAAAAAAGAAAGAACCGCGACCTACGGAAATACTTTAGTACGCGATTCTTTTGATGGACCAGACTATGCTGTGATCGATACCCTCTTTTCACTCGCGGAAGCCTACTTGTTTGCCCAACTGGTTAATTTCAAGGACAATTTTCGAAGAAAGTTTCCACAAACCACTGATTATGCTCGTATGTACCAAGATGTTCGAAACGCGATAGATTCGTGCCATCGAGATGGAACATTGAAGAAAGAGGTCGCAAAAGATCCCAAAGGGTATATCATTAGTGATGCCGCGATAATTCCCATGCTTAAAATGCTCAAAGATTCCGGACGAGCTACATTTTTGGTGACAAACAGTTTATGGGACTACACGAACACTGTCATGAATTTCCTCAGTGGATCCAGTGATGTAAATGATGATGGCAGTATCAATTTTGACTGGCTTCAATACTTTGATGTGGTTATCACTGGCAGCGAAAAGCCAGGCTTTTTTGCTGACAAACGCGCCAACCTATTTGAGGTTGTGCCTGAGACTGGAATGCTACTTAATACAGATAATGGCTCTCCAATGCCTAAGGTAAGCACAACAGCATCAAATTCATATCATTGCATTCAGTCATTTGATGATCTTGGAGGTTCTGTTGGTCACCTGCATAAGCTACTTTCCATCGAATCAAGTTCACAGGTTCTATATGTTGGGGATCACATTTATGGAGATATAGTACGTAGCAAGAAGGTTCTGGCAGGATGGAGAACAATGCTGGTAATCCCAGAGCTCGACGATGAGCTTGAAAGCCTATGGGAATCGAGACATCTTCGAGAGGAGCTTCAAAACACGAGGATAAAGCGTGCTCGAATGGAGCGCGAGTTATATGATCTGGAGCGGCGCCGGTCTCTCGAGTTAGTACAACTCTGGACATTATTCATGTCTTTTAATGTATTGACAATTAAGCTATTGCAGTTTCACAAGACATGGGGCCAACTGATGAAGGCGGGTAATCTGAACTCTCGCTTTGCTCACCAGGTTGAGAGATTCGCCTGCCTTTACACTAGCCAAGTAACCAACTTGGGCTATTATTCTGCAGACAATTACTACAGACCCGCTGAAGACTTAATGAATCATGACCATGCAATTAAAAATGCTGAACTCTAA 1551 0.4346 MHATDEGSSSVSGSGRPPKRPRTMASSSLDSESPKTNFRRTIFCNRPLNMKHIAAVGFNLDYTLAQYYRDAFESLAYKSAVRKLVYDLNYPGELLTWKFAPYYFIRGLVLDIKRGNILKMDRHKYVKVAHHGFKEMSKKERTATYGNTLVRDSFDGPDYAVIDTLFSLAEAYLFAQLVNFKDNFRRKFPQTTDYARMYQDVRNAIDSCHRDGTLKKEVAKDPKGYIISDAAIIPMLKMLKDSGRATFLVTNSLWDYTNTVMNFLSGSSDVNDDGSINFDWLQYFDVVITGSEKPGFFADKRANLFEVVPETGMLLNTDNGSPMPKVSTTASNSYHCIQSFDDLGGSVGHLHKLLSIESSSQVLYVGDHIYGDIVRSKKVLAGWRTMLVIPELDDELESLWESRHLREELQNTRIKRARMERELYDLERRRSLELVQLWTLFMSFNVLTIKLLQFHKTWGQLMKAGNLNSRFAHQVERFACLYTSQVTNLGYYSADNYYRPAEDLMNHDHAIKNAEL* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2180 516 MobiDBLite consensus disorder prediction 1 35 - -
Dod08g2180 516 Coils Coil 402 429 - -
Dod08g2180 516 Gene3D - 195 418 IPR023214 -
Dod08g2180 516 MobiDBLite consensus disorder prediction 1 16 - -
Dod08g2180 516 PIRSF NT5C2 19 516 IPR016695 -
Dod08g2180 516 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 18 429 IPR008380 -
Dod08g2180 516 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 452 511 IPR008380 -
Dod08g2180 516 SUPERFAMILY HAD-like 40 510 IPR036412 -
Dod08g2180 516 TIGRFAM HAD-IG-Ncltidse: HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase 42 409 IPR008380 -
Dod08g2180 516 PANTHER CYTOSOLIC PURINE 5-NUCLEOTIDASE 18 429 - -
Dod08g2180 516 PANTHER CYTOSOLIC PURINE 5-NUCLEOTIDASE 452 511 - -
Dod08g2180 516 Pfam 5' nucleotidase family 42 509 IPR008380 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2180 Dod-Chr8 49574160 49579953 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g2180 - - mtr:MTR_3g111870 611.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2180 08 49574160 49579953 Dod08g2180 08 49574160 49579953 ECH