Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2162 ATGCCATCTAATAATTACTTTTCAAGACTAAGATCAATTGTGGGGAAGGAGGGTGGAACCAAGGACTGTGTTGAGGTTCTGATTGGACAGGGGAAGTTACTGTTTGGTAGAGGATCAAGGTTTGTTCATTCTGTGGATTGCTCATATTGTGTGGACCCGCCCCGGATTGCACGTCCTGGGGTTGCCTTAGCTCCTTCGAGCTGGGAATTAGTTGGCAAAAGAAGAACTTTGTCTGTGGTTGACACATTGTCCCGTACAATTTCGGTTCCTTCTGTATCGGGGCCTTCGTTTCAGGTTTGTGGACACCACATTGATTGTGCACTATCTGGACAGGATCAGTTTTCGGCTGGCAGGAAACTTCAGAGTAAAACAATGGCTGCTCACTTGTCCAGAGCTGTGGTTCGAGAATGCTATTTAGATAGCTCAGCTTTGAAGCATAGTCATCGGTCACCTTCAATAAAGAATAGCAGTGGTATAGCTTTGAGCACAAGTTTGGCCAATGGGAAAAAAGTGAGCATGAGTTTGGAAAACCATCGGCGGCCAGATAATCGCGCAATTTGTGGCTTCTTTATTTATAATGCTGCAAAGACTTGGCTTAGTTCTCACCCCTTTACAGAGTCAGGGTCTAGAGATTTCCATAGCTCATCAACATCATCTTTCTCTGTTGGGCCTGCACACGATGTACCGTTTGACACCTCTTCCCGGGAGGAGCAGCCAACAAACTCTGCAGATTCAAGCGAACAGAAAAATCCCTCGGGCAAAAACCTCAAGTTAGTATCAGGATCATGCTACTTGCCCCATCCTGATAAAGAAGAAACTGGTGGAGAAGATGCTCATTTCATATGTTCTGAGGAACATGCGATTGGGGTGGCTGATGGTGTTGGTGGCTGGGCCGATCTTGGTGTTAATGCTGGATATTACTCTCGTGAACTCATGTCCAATTCAGTAGATGCTATTCAGCAGGAGCCCAAAGGTTCAATTGACCCAGCTAGGGTGCTGGAGAAAGCACACTCAATTACAAAAGCTAGGGGTTCTTCTACAGCATGCATCATTGCACTCACTGATCAGGGGCTTCATGCTATTAATTTGGGAGATAGTGGGTTTATGGTGATCCGTGATGGATGCACCATATTCCGATCCCCAGTGCAGCAGCATAATTTCAATTTCACCTATCAGCTGGAAAGTGGCAATAATGGCGATTTACCTAGTTCTGGTCAGGTTTTTACGGTTCCTGTCACTCCCGGGGATGTCATAGTTGCTGGTACAGATGGACTGTTTGATAACTTGTACAACAATGAGATTACAGCGGTGGTGGTTCATGCCGTAAGAGCCGGCTTTAGCCCTCAGGTGACAGCCCAGAAGATAGCCGCATTGGCACGTCAACGCGCGCTGGACAAAGACAGGCAGACCCCATTCTCCACAGCGGCTCAAGATGCCGGATTCCGATACTATGGCGGCAAGCTAGATGATACTACAGTAGTTGTTTCATATATTACTGGCTCTAAAGATGCATAA 1515 0.466 MPSNNYFSRLRSIVGKEGGTKDCVEVLIGQGKLLFGRGSRFVHSVDCSYCVDPPRIARPGVALAPSSWELVGKRRTLSVVDTLSRTISVPSVSGPSFQVCGHHIDCALSGQDQFSAGRKLQSKTMAAHLSRAVVRECYLDSSALKHSHRSPSIKNSSGIALSTSLANGKKVSMSLENHRRPDNRAICGFFIYNAAKTWLSSHPFTESGSRDFHSSSTSSFSVGPAHDVPFDTSSREEQPTNSADSSEQKNPSGKNLKLVSGSCYLPHPDKEETGGEDAHFICSEEHAIGVADGVGGWADLGVNAGYYSRELMSNSVDAIQQEPKGSIDPARVLEKAHSITKARGSSTACIIALTDQGLHAINLGDSGFMVIRDGCTIFRSPVQQHNFNFTYQLESGNNGDLPSSGQVFTVPVTPGDVIVAGTDGLFDNLYNNEITAVVVHAVRAGFSPQVTAQKIAALARQRALDKDRQTPFSTAAQDAGFRYYGGKLDDTTVVVSYITGSKDA* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2162 504 MobiDBLite consensus disorder prediction 234 257 - -
Dod08g2162 504 PANTHER PROTEIN PHOSPHATASE 88 503 - -
Dod08g2162 504 SMART PP2C_SIG_2 258 498 IPR001932 -
Dod08g2162 504 SMART PP2C_4 249 496 IPR001932 -
Dod08g2162 504 Gene3D - 401 503 IPR036457 -
Dod08g2162 504 Gene3D - 268 394 IPR036457 -
Dod08g2162 504 Pfam Stage II sporulation protein E (SpoIIE) 287 496 IPR001932 -
Dod08g2162 504 ProSiteProfiles PPM-type phosphatase domain profile. 262 498 IPR001932 -
Dod08g2162 504 PANTHER PROTEIN PHOSPHATASE 2C 88 503 IPR039123 -
Dod08g2162 504 MobiDBLite consensus disorder prediction 210 275 - -
Dod08g2162 504 SUPERFAMILY PP2C-like 263 495 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2162 Dod-Chr8 49386813 49391975 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g2162 K17508 - gmx:100805475 777.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2162 08 49386813 49391975 Dod08g2162 08 49386813 49391975 ECH
Dod02g0595 02 7702803 7706483 Dod08g2162 08 49386813 49391975 ECH