Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2161 ATGGCGGGTCGCAGGGACGCGTTTCTGACCAGAGAGAAACCGTCGCAATCCGCCGTCGGATCTCGGATCGCCGTCGCAGTCGTGATCGGCGTCCTCTTCGGCTGCTTCTTAGCCTTCTCCCTTCCGCATGGCTTCTTCTTCGATCCTCCTCATTCCGGTCGCACTATCAGAACTCGAATTTCCCATCCTCAGATTGTTTCATCTGCGTGTGAATCGCCGGAACAAGTTAATGCGCTGAAAACAGATATTCTGTCAGCAAGGGAGAAGAATTCTGAACTCAAGAAACAGGTCAGAAGCCTAATGGAAAGGCTGCGGATGACTGAGCAAGGGAAGGGACATGCACAGGAGCAGGTTGTTGTGCTGGGTGAGAAGCACAAGGCTGGGCCTTTTGGCACTGTCAAGGGTCTCAGAACAAATCCAACCATCATTCCTGATGAATCCTTGAATCCAAGATTGGCGAAAATCTTGGAGGAAGTTGCTATTTATAAAGAACTTATAGTTTGCCTTGCAACCTATAATGTGAAGGAGATGTTGGAGGTCTGGTTCACCAACATCAAGAGGGTTGGCATACCTAATTATCTAGTGGTTGCCTTGGATGATGCGACTGAAGAATTCTGCAAATCAAATGATGTTCCGGTCTATAGAAGAGATCCAGATGAATATGTCGATTCAATTGCTAGGGCATCTAATAACCACGCTGTCTCGGGATTGAAATTTCGTATTCTGAGAGAATTTTTGCAACTGGGTTACAGTGTTCTTCTCTCAGATGTTGATATTGTATACTTGCAGAACCCATTTGACCATCTGTATAGGGATTCAGATGTGGAGTCAATGTCTGATGGTCACAATAACATGACGGCTTATGGCTATAATGATGTCTTTGATGAACCTTCAATGGGTTGGGCGCGATATGCTCATACAATGAGAATATGGGTTTACAACTCTGGTTTCTTTTACATAAGACCTACACTTCCTTCAATCGAGCTCTTAGATCGTGTAGCTACCAGGCTTTCTCAGGATCAAAGAGCCTGGGACCAGGCAGTTTTTAATGAAGAACTCTTTTTCCCTTCACATCCTGGTTATGATGGCCTTCATGCTGCCAAAAGAACAATGGATATGTACCTTTTTATGAACAGTAAGGTTCTCTTCAAAACAGTTAGAAAAAATGATAACCTTAAGAAATTGAAGCCAGTGACTGTGCATGTTAACTACCATCCTGATAAATTTGCAAGAATGAAAGCAATAGTTGATTTCTATGTCAATGGTAAACAAGATGCTCTGAATAATTTCCCAGATGGCTCTGATTGGTAG 1311 0.4371 MAGRRDAFLTREKPSQSAVGSRIAVAVVIGVLFGCFLAFSLPHGFFFDPPHSGRTIRTRISHPQIVSSACESPEQVNALKTDILSAREKNSELKKQVRSLMERLRMTEQGKGHAQEQVVVLGEKHKAGPFGTVKGLRTNPTIIPDESLNPRLAKILEEVAIYKELIVCLATYNVKEMLEVWFTNIKRVGIPNYLVVALDDATEEFCKSNDVPVYRRDPDEYVDSIARASNNHAVSGLKFRILREFLQLGYSVLLSDVDIVYLQNPFDHLYRDSDVESMSDGHNNMTAYGYNDVFDEPSMGWARYAHTMRIWVYNSGFFYIRPTLPSIELLDRVATRLSQDQRAWDQAVFNEELFFPSHPGYDGLHAAKRTMDMYLFMNSKVLFKTVRKNDNLKKLKPVTVHVNYHPDKFARMKAIVDFYVNGKQDALNNFPDGSDW* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2161 436 PANTHER GLYCOSYLTRANSFERASE 1 435 - -
Dod08g2161 436 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
Dod08g2161 436 Pfam Nucleotide-diphospho-sugar transferase 190 409 IPR005069 -
Dod08g2161 436 PANTHER ARABINOSYLTRANSFERASE RRA3 1 435 IPR044290 GO:0016757|GO:0080147
Dod08g2161 436 Coils Coil 76 110 - -
Dod08g2161 436 SUPERFAMILY Nucleotide-diphospho-sugar transferases 166 372 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2161 Dod-Chr8 49382002 49384985 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g2161 K20783 - gmx:100804935 699.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2161 08 49382002 49384985 Dod08g2161 08 49382002 49384985 ECH