Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2153 ATGCTATTAGAACAAGCAATGGAAAGTGGCGTGAATGGTGTGAGTAGTGGTGTTGGGGGGTTCACTCATCAGTTGCAACAGCAGCAGCAGCAGCAGAATAGCTGCTTCTACGGTGATAGCAGCGAGGAGGAGCTATCGGTGCTCCCTCGGCACACAAAAGTTGTGGTAACTGGGAACAACCGCACCAAATCCGTCCTCGTTGGTCTCCAAGGTGTTGTTAAGAAAGCCGTTGGGTTAGGAGGATGGCACTGGCTGGTCCTTACTAATGGTATTGAAGTGAAGCTGCAAAGGAATGCCCTTAGTGTGATTGAAGCACCCACCGGGAATGAGGAAGATGACGATCTTGAATTCGAAAATGTTCAGTGGAATGGATCAGAAATGGCATCGGATGACACTCAAAAGTCCCACAAATCGAGGCATAGAATGTATAGATCGTTGGGATCATCTCACAAGACTATGAGCAGGTCCTTCTCTGGTGATTCACAATCTAAGGGGTCCATTTCAATGCCTCATGGATGGACGAAGGTTGACCTGAGCAAATTGGAGATGGCTGCATTGTGGAGATATTGGAGACACTTCAATCTGGTGGATGCTGTCCCAAACCCATCGAAAGAGCAGCTAGTAGATGTTGTTCAGAGGCATTTCATGTCACAGCAAATGGACGAGTTGCAGGTGATTATGGGATTTGTCCAAGCTGCAAAGAGGCTTAAGACTGTCTGCAAATGA 726 0.4752 MLLEQAMESGVNGVSSGVGGFTHQLQQQQQQQNSCFYGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENVQWNGSEMASDDTQKSHKSRHRMYRSLGSSHKTMSRSFSGDSQSKGSISMPHGWTKVDLSKLEMAALWRYWRHFNLVDAVPNPSKEQLVDVVQRHFMSQQMDELQVIMGFVQAAKRLKTVCK* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2153 241 Pfam Sin3 binding region of histone deacetylase complex subunit SAP30 181 234 IPR025718 GO:0005515
Dod08g2153 241 PANTHER HISTONE DEACETYLASE COMPLEX SUBUNIT SAP30 SIN3-BINDING PROTEIN 34 241 - -
Dod08g2153 241 PANTHER SAP30 34 241 IPR024145 -
Dod08g2153 241 Gene3D - 156 241 IPR038291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2153 Dod-Chr8 49279744 49283387 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g2153 - - adu:107495972 415.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2153 08 49279744 49283387 Dod08g2153 08 49279744 49283387 ECH