Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2040 ATGGGTCGTTGGGCTATTGCTGTGCATGGTGGCGCTGGTGTTGACCCAAATCTCCCTCTCCAACGCCAAGAAGAAGCCAAACAACTCCTCACTCGCTGTCTCAATCTTGGCATCTCTGCTCTTCGTTCCAATCTCTCCGCCATCGATATTGTCGAACTCGTCGTGAGGGAATTGGAAACAGATCCATTGTTCAACTCAGGGCGTGGATCTGCCCTTACAGAGAAGGGGACTGTGGAAATGGAGGCAAGCATAATGGATGGACCAAAGAGACGATGCGGCGCCGTTTCGGGGCTCACCACGGTGAAGAACCCAATCTCACTGGCGCGTTTGGTGATGGACAAGTCACCTCATTCGTACCTAGCCTTCTCTGGCGCTGAAGATTTCGCAAGGCAACAGGGTGTGGAGCTTGTGGACAACGAATACTTCATCACCCCTGAAAATGTTGGCATGCTCAAACTCGCAAAGGAAGCAAATGCAATCCTGTTCGATTACAGAATCCCAACAAGTGGGTACGAGACCTGTGGTTCAGGGGTGGAGTCCCCACTGCAAATGAACGGCCTCCCAATCAGCGTCTACGCGCCTGAGACAGTCGGGTGCGTGGTAGTTGATCGAGAGGGCCGTTGTGCTGCTGCCACATCGACCGGCGGCCTCATGAACAAGATGACCGGTCGCATCGGTGACTCGCCCTTAATTGGGTCTGGGACCTACGCGTGTAACCTCTGCGGTGTCTCCTGCACGGGCGAAGGCGAAGCCATTATACGCGCCACGCTGGCGCGTGAGGTTGCAGCCGTCATGGAGTACAAGGGATTGGGCCTCCAAGAGGCAGTGGACTTTTGCATCAAGAACAGGCTCGATGAAGGGAAGGCTGGGCTCATTGCGGTTTCATCAAATGGTGAAGTGGCTTATGGGTTTAATTGCAATGGCATGTTCAGGGGTTGTGCCACTGAGGATGGGTTCATGGAGGTTGGAATTTGGGAATAG 981 0.5403 MGRWAIAVHGGAGVDPNLPLQRQEEAKQLLTRCLNLGISALRSNLSAIDIVELVVRELETDPLFNSGRGSALTEKGTVEMEASIMDGPKRRCGAVSGLTTVKNPISLARLVMDKSPHSYLAFSGAEDFARQQGVELVDNEYFITPENVGMLKLAKEANAILFDYRIPTSGYETCGSGVESPLQMNGLPISVYAPETVGCVVVDREGRCAAATSTGGLMNKMTGRIGDSPLIGSGTYACNLCGVSCTGEGEAIIRATLAREVAAVMEYKGLGLQEAVDFCIKNRLDEGKAGLIAVSSNGEVAYGFNCNGMFRGCATEDGFMEVGIWE* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2040 326 CDD Asparaginase_2 5 318 - -
Dod08g2040 326 Gene3D (Glycosyl)asparaginase 196 326 - -
Dod08g2040 326 PANTHER PEPTIDASE T2, ASPARAGINASE 2, NUCLEOPHILE AMINOHYDROLASE-RELATED 1 326 - -
Dod08g2040 326 PANTHER L-ASPARAGINASE 1 326 IPR000246 GO:0016787
Dod08g2040 326 Pfam Asparaginase 4 325 IPR000246 GO:0016787
Dod08g2040 326 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 323 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2040 Dod-Chr8 47741954 47744793 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g2040 3 260 Miscellaneous Gene Families AT4G00590 28.929 1.48e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g2040 K13051 - gmx:547703 616.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2040 08 47741954 47744793 Dod08g2040 08 47741954 47744793 ECH