Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2019 ATGGGAATTTCTGTTCAAGAGAACGATGTAAAGGAAGGAGATGATGATGATGATGATGATTGGGAAGGGATTGAGAGGAGCGAGTTGGAGAAAGTGTTCATGATGGCCACGGAATTTGTGGGCGGTGAAGGAGACGGGTTGGGGAGTGATGTGCAAATGGAGTTGTATGGACTTCACAAGATTGCAACAGAAGGGCCTTGTCGGGAGCCTCAGCCAATGCCTCTCAAGCTCTATGCACGTGCCAAGTGGAATGCTTGGCAAAAGCTGGGGAACATGAATCCAGATGTTGCTATGGAGCAGTATATCAGCCTTATTTCGGATAAAGTTCCTGGATGGAAGAAGGATTCTTCTTCTGCTGGAATGAGTGAACATGAACATAAAGGGTCAGAAGTTTCTGAGTCTGCTGCTCCTGATTTGAGCACATCGTTGTCTCATCAACAAATGATCATAACTGAAAGGGAACTTGAACAAGAGTCTGGTGCCCGGGACCATAGCACACTTAAAGAGACAGATTTGGAGAACAATGTGAAGAAATGA 537 0.4562 MGISVQENDVKEGDDDDDDDWEGIERSELEKVFMMATEFVGGEGDGLGSDVQMELYGLHKIATEGPCREPQPMPLKLYARAKWNAWQKLGNMNPDVAMEQYISLISDKVPGWKKDSSSAGMSEHEHKGSEVSESAAPDLSTSLSHQQMIITERELEQESGARDHSTLKETDLENNVKK* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2019 178 PANTHER ACYL-COA-BINDING PROTEIN, ACBP 10 168 - -
Dod08g2019 178 MobiDBLite consensus disorder prediction 134 150 - -
Dod08g2019 178 Pfam Acyl CoA binding protein 31 104 IPR000582 GO:0000062
Dod08g2019 178 MobiDBLite consensus disorder prediction 118 132 - -
Dod08g2019 178 Gene3D - 23 130 IPR014352 -
Dod08g2019 178 MobiDBLite consensus disorder prediction 151 178 - -
Dod08g2019 178 MobiDBLite consensus disorder prediction 112 178 - -
Dod08g2019 178 SUPERFAMILY Acyl-CoA binding protein 28 113 IPR035984 GO:0000062
Dod08g2019 178 MobiDBLite consensus disorder prediction 1 23 - -
Dod08g2019 178 PANTHER ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 3 10 168 - -
Dod08g2019 178 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 29 114 IPR000582 GO:0000062
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2019 Dod-Chr8 47426814 47429664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g2019 16 125 Acyl Lipid Metabolism Gene Families AT4G24230 57.522 1.72e-41 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g2019 - - aprc:113847126 261.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2019 08 47426814 47429664 Dod08g2019 08 47426814 47429664 ECH