Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1988 ATGGAGAAAATCTGCGTCGCCGTTCGACTTCGCCCTACGGTTTCAGAAGATTCCTCGAATGGAACCTTCTGGAAGGTCGAAGAGAATCGCGTTTCACTTCACAGGATTCACGGCACCCCACTCTCCAACTCTTCTTATGCTTTCGATCATGTGTTCGATGAAAGCAGCACGAATGCTAGTGTGTACGAGCTTCTCACTAAGGATATTATTCATGCTGCGCTCGATGGATTCAATGGAACTGCATTTGCTTATGGGCAGACCAGTAGTGGGAAGACCTTCACCATGAATGGTTCCGAAACTGACCCGGGAATAATTCCTCGGGCAGTTAAAGATATATTTGCCAAAATTGAAACGATGTCTGATCGAGAGTTCCTGATAAGAGTTTCTTACATGGAGATATATAATGAAGAAATTAATGATCTCCTAGTTGTTGAAAATCAGAAGTTGCAAATTCACGAGAGTTTGGAGCGTGGAGTATTTGTTGCAGGGCTACGAGAGGAAATTGTCAATAATGCTGAACAAGTGTTGAAGCTCATTAACTGCAGGGGAAGGCACTTTGGTGAAACAAATATGAATGCTAGGAGTAGCAGATCACATACAATATTTAGAATGGTGATTGAAAGCAAAGGGAAGGATTCCAATTCTTCTGATGGTTGTTTAATCAATGATATTGTTCGAGTGTCTGTCTTGAATTTAGTAGATTTAGCTGGTTCGGAAAGGATTGCTAAGACTGGAGCTGACGGAGTACGTTTAAAAGAAGGAAAATATATTAACAAGAGCTTGATGGTTTTGGGAAATGTTATCAACAAACTAAGTGATGGTTCCAAGCAAAGGGGGCATATCCCATACCGTGATAGTAAATTAACTCGTATACTCCAACCTGCTCTTGGCGGCAATGCAAAAACCTCCATTATTTGTACCATAGCACCAGAAGAGATTCATATTGAAGAAACAAGAGGGACTCTTCAGTTCGCTAGTAGAGCCAAACGCATCACCAATTGTGTTCAAGTGAATGAGATCTTGACAGATGCGGCCTTGTTAAAGCGGCAACAGTTAGAAATAGAGGAGCTACGTAAGAAACTTCAGGGATCCCATGCTGAGGTGCTGGAGCAAGAGATTCTTAAACTCAGGAATGATTTGCTCAAGTATGAGATGGAGCGTGGGAAGCTTGAAATGGAACTGGAAGAGGAGAGGAAATCACGGGATCAATGGATTAGGGAGCAACGGATGAAAATTGAAAATTCCAGTACTATGTCTTTCTCAGACTGTGACACAAATGACAGTCAGGGATTTCGTAGGCACAAATTTCTCGAAGAGTGCAGTGATATTAACAGTACATCTCATGGAGATATTTTTAAATCTCCCTGTTTAAAGACAAATCCCAGTGCTTTTGTTGCCAAGCGATCAAAGCATTCAACATTGCCTGATTGCAGCCCTCCTCTTCCCGATGCTTTCAGCAATGTGGCTGATGAAGACTTGTGGCTGAAAATGAACAATGGTTATGTTGCAGACCTTGATTCGCTTCAAACTACTCCCACTGGAAAAGTTCAATCACTCCCAACAAGTGATACAACTCCTGTTTGTACTAGTGAAATAAAAAAGTATGATTACGAGGCTCAAGATTTGAGGAGACAACTGGAACTTGCCAATGAAAAGATCAATGAACTTGAGAGAAAGCATTCAGATGAAGCACCATTGAGCAAGCAATTAATCGATGAGACACCTGTATATCAACAAGAGACACAACTAATTCAAGAATTGCCTCTGATCTCAGAATCTGTGGAAAACTTCAAAAACAGCTTTGAGGAGGTTTTGTCAGTGATGCAGCGATTTGCATCTGGTGGCAAGTTATCAAATGCAAAGATGCTTTCAACCATGAGTGAAATTAGTGCACTACTGTTTGCAACTTTGGAAGCTTCCTTTGCTGTGAAGATGGATGGTCAAAGGTCTTGCACTGGGAATTATGCATCAATACATGAACAACAAAAATTATTTCATGAGAAGGTGAATAATATCATTACATCACTGGAGTTATCAGAGAGCTCATCAACGGAAGGGCAGGAGAGGAGTCCTTTGTGCACCTGTGAACACAAGGGCTCTGATTTAGGAGGAGAAACTGCTTATTCAATGGAGCTTTTAAATGAAAGATATGAAAGCCTGGAAAAGGAGTTTCTACTTCTGAAGGATGAAAGAGACTCTTTGCTCCAGATGTTCTCTAAATTATCAGACAAACATGCAATGGTTTCAAGCCAAAAGGAAAATGCTTTGAAAGATTTAAATACTGAAGTACAGAGAAGGAAAAATCTAGAAGGGGAGGTTAAGCAGTTTACTGCAGCTTTTGCCTGTCGTCAGAAATCACTCATGTCCTTCCATAGTGATTTTAAGAATAGAATTGAGAAATTGAGGGCCCAGACTTCAATCTCAGTGCCTAAAACTTTAGGCTGTCAAGACTAG 2454 0.4087 MEKICVAVRLRPTVSEDSSNGTFWKVEENRVSLHRIHGTPLSNSSYAFDHVFDESSTNASVYELLTKDIIHAALDGFNGTAFAYGQTSSGKTFTMNGSETDPGIIPRAVKDIFAKIETMSDREFLIRVSYMEIYNEEINDLLVVENQKLQIHESLERGVFVAGLREEIVNNAEQVLKLINCRGRHFGETNMNARSSRSHTIFRMVIESKGKDSNSSDGCLINDIVRVSVLNLVDLAGSERIAKTGADGVRLKEGKYINKSLMVLGNVINKLSDGSKQRGHIPYRDSKLTRILQPALGGNAKTSIICTIAPEEIHIEETRGTLQFASRAKRITNCVQVNEILTDAALLKRQQLEIEELRKKLQGSHAEVLEQEILKLRNDLLKYEMERGKLEMELEEERKSRDQWIREQRMKIENSSTMSFSDCDTNDSQGFRRHKFLEECSDINSTSHGDIFKSPCLKTNPSAFVAKRSKHSTLPDCSPPLPDAFSNVADEDLWLKMNNGYVADLDSLQTTPTGKVQSLPTSDTTPVCTSEIKKYDYEAQDLRRQLELANEKINELERKHSDEAPLSKQLIDETPVYQQETQLIQELPLISESVENFKNSFEEVLSVMQRFASGGKLSNAKMLSTMSEISALLFATLEASFAVKMDGQRSCTGNYASIHEQQKLFHEKVNNIITSLELSESSSTEGQERSPLCTCEHKGSDLGGETAYSMELLNERYESLEKEFLLLKDERDSLLQMFSKLSDKHAMVSSQKENALKDLNTEVQRRKNLEGEVKQFTAAFACRQKSLMSFHSDFKNRIEKLRAQTSISVPKTLGCQD* 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1988 817 CDD KISc_CENP_E 3 331 - -
Dod08g1988 817 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 363 IPR027417 -
Dod08g1988 817 PRINTS Kinesin heavy chain signature 229 247 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dod08g1988 817 PRINTS Kinesin heavy chain signature 281 302 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dod08g1988 817 PRINTS Kinesin heavy chain signature 189 206 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dod08g1988 817 PRINTS Kinesin heavy chain signature 76 97 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dod08g1988 817 Gene3D Kinesin motor domain 1 363 IPR036961 -
Dod08g1988 817 Coils Coil 532 559 - -
Dod08g1988 817 Coils Coil 752 772 - -
Dod08g1988 817 Coils Coil 347 407 - -
Dod08g1988 817 PANTHER CENTROMERE PROTEIN E 2 805 - -
Dod08g1988 817 Coils Coil 710 737 - -
Dod08g1988 817 PANTHER CENTROMERE PROTEIN E 2 805 - -
Dod08g1988 817 ProSiteProfiles Kinesin motor domain profile. 3 331 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dod08g1988 817 SMART kinesin_4 1 339 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dod08g1988 817 Pfam Kinesin motor domain 9 331 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dod08g1988 817 ProSitePatterns Kinesin motor domain signature. 228 239 IPR019821 GO:0003777|GO:0005524|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1988 Dod-Chr8 47010688 47018101 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1988 4 393 Miscellaneous Gene Families AT2G21380 44.472 6.55e-90 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1988 K11498 - gmx:100804944 1220.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1988 08 47010688 47018101 Dod08g1988 08 47010688 47018101 ECH