Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dod08g1953 | ATGGATAAAGAGTCACATAACAACCATAACAATTCTAGCGTTAGAGATAGAGACAAAAGCGGAGGAGGAGGTGTTGATGGGTCGTTGTTATTGAGGGCTAGCTCCGATACAATCAGGCCAACGACGACGTCTGATTTGGTTCTTCAATGGGGTAACCGGAAGAGACTACGGTGCATGAAGGTTCAGGTCAAGGACGCCTCTTCAAACCCGGTTCAACGAACCAGGGTTCGAGTGGATCGCCGGGTTGTTAGAACCGATAAGGATTATTCTTCAAATCACCCCACAACCTCTTTCACCAATAACAATAACCATAGTCATAGTCATAATCATAATAATACTATTACTAACGGGTACCCAAATCTCCGTCAACGGGCGCCTTCACCGCAGCAACCTCTTCACCAGCGAGTCCTCAGGAATTCGGAAACTTCGAGTGCTATGAGAGGCGGCCAAAGCAACGGGAGTGTTAGGGGAATTGCCTCACCGGACAGGGGTGCGCACGATAAGAGAGGAGGGGCCCATAACAACCACCTTAGTGACAATAATAATAACAAGTCTGGGGCCTCATCGGATACTGCGCACGATAGCAAGAAGGGTGGGTCACCGTCAGGCAGTGGGGATGCTGCTCCGCCGGTGTGGCCACCCAAGTTCGTGATTGCCTTGACCAACAAGGAGAAGGAAGAAGATTTTCTGGCAATCAAGGGTTCAAAGCTGCCTCAGAGACCAAAGAAGAGAGCCAAATTCATACAACGAACCCTCAATCTCGTAAGTCCGGGAGCATGGCTATGTGATCTTACCTTGGAGCGATACGAGGTTAGGGAGAAGAAGATAACCAAAAAGAGACCGAGAGGTTTAAGAGCAATGGGCAACATGGACTCCGATTCTGAATAA | 888 | 0.4887 | MDKESHNNHNNSSVRDRDKSGGGGVDGSLLLRASSDTIRPTTTSDLVLQWGNRKRLRCMKVQVKDASSNPVQRTRVRVDRRVVRTDKDYSSNHPTTSFTNNNNHSHSHNHNNTITNGYPNLRQRAPSPQQPLHQRVLRNSETSSAMRGGQSNGSVRGIASPDRGAHDKRGGAHNNHLSDNNNNKSGASSDTAHDSKKGGSPSGSGDAAPPVWPPKFVIALTNKEKEEDFLAIKGSKLPQRPKKRAKFIQRTLNLVSPGAWLCDLTLERYEVREKKITKKRPRGLRAMGNMDSDSE* | 296 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dod08g1953 | 295 | MobiDBLite | consensus disorder prediction | 89 | 157 | - | - | |
| Dod08g1953 | 295 | PANTHER | INTEGRATOR COMPLEX SUBUNIT 6 HOMOLOG | 1 | 295 | - | - | |
| Dod08g1953 | 295 | PANTHER | PUTATIVE (DUF1639)-RELATED | 1 | 295 | - | - | |
| Dod08g1953 | 295 | MobiDBLite | consensus disorder prediction | 175 | 198 | - | - | |
| Dod08g1953 | 295 | Pfam | Protein of unknown function (DUF1639) | 220 | 269 | IPR012438 | - | |
| Dod08g1953 | 295 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
| Dod08g1953 | 295 | MobiDBLite | consensus disorder prediction | 62 | 213 | - | - | |
| Dod08g1953 | 295 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
| Dod08g1953 | 295 | MobiDBLite | consensus disorder prediction | 74 | 88 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dod08g1953 | Dod-Chr8 | 46399246 | 46406597 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dod08g1953 | - | - | aprc:113865928 | 386.726 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Dod08g1953 | 08 | 46399246 | 46406597 | Dod08g1953 | 08 | 46399246 | 46406597 | ECH |