Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1932 ATGGGCTTGAGTTCTAGTCCTCCTGCAGCACAAGCAGACGCATCAACCATGGCCATGGATGATTGCCCTGATCAGAAATGTGGCTACACTGCTAAGGATCTAGCACGCCTTGCTGAAGAGACCAGATTCACTGTTAATGAAGTGGAGGCATTGAATGTGCTTTTTAAGAGGTTAAGTAGCTCCATAATCAATGATGGTTTGATTCACAAGGAGGAGCTTCAGTTGGCGCTATTCCAAACCCCAAATGGAGATAGTCTTTTCCTGGACCGAGTTTTTGATCTTTTTGATGAAAAGAGAAATGGTGTTATAGAGTTTGATGAATTTGTCCATGTGCTCAGTGTTTTCCATCCTTATGCCCCCATGGATGAAAAAATTGATTTTGCATTTAAGCTGTATGATCTGAGGGAAACAGGGTTCATTGAGCGAGGGGAAGTCAAACAAATGGTTATAGCCATTTTGATGGAATGTGACATAAATCTTACGGATGATCTTCTTGAAGCTATTGTTGACAAGGAAAACCTTAATCAGAATACTCGGCTTTGTAACATACAGTTACTTGATCAGGCAACATGCAATGTTGCTTGA 585 0.412 MGLSSSPPAAQADASTMAMDDCPDQKCGYTAKDLARLAEETRFTVNEVEALNVLFKRLSSSIINDGLIHKEELQLALFQTPNGDSLFLDRVFDLFDEKRNGVIEFDEFVHVLSVFHPYAPMDEKIDFAFKLYDLRETGFIERGEVKQMVIAILMECDINLTDDLLEAIVDKENLNQNTRLCNIQLLDQATCNVA* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1932 194 PANTHER CALCINEURIN B 22 172 IPR045198 GO:0005509|GO:0019722|GO:0019900
Dod08g1932 194 PANTHER CALCINEURIN B-LIKE PROTEIN 10 22 172 - -
Dod08g1932 194 Gene3D - 33 188 - -
Dod08g1932 194 PRINTS Recoverin family signature 91 112 - -
Dod08g1932 194 PRINTS Recoverin family signature 138 156 - -
Dod08g1932 194 PRINTS Recoverin family signature 29 43 - -
Dod08g1932 194 ProSiteProfiles EF-hand calcium-binding domain profile. 83 118 IPR002048 GO:0005509
Dod08g1932 194 ProSiteProfiles EF-hand calcium-binding domain profile. 120 155 IPR002048 GO:0005509
Dod08g1932 194 SMART efh_1 124 152 IPR002048 GO:0005509
Dod08g1932 194 SMART efh_1 87 115 IPR002048 GO:0005509
Dod08g1932 194 SUPERFAMILY EF-hand 34 176 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1932 Dod-Chr8 46110077 46117801 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1932 33 171 EF-hand Containing Proteins AT4G33000 73.381 5.77e-71 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1932 K06268 - nnu:104586607 238.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1932 08 46110077 46117801 Dod08g1932 08 46110077 46117801 ECH