Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1903 ATGGCTGAACAAGAAACACCATCACCACCACCACCACCACCACCACCACCACCACCAACAAAGTACATTTCACTTGAACAACTGAGCAAACACAACACAAAAGAAGATCTATGGATCTCCATTCACGGCAAGGTCTACAACGCTTCCACCTGGCTCCAACACCATCCAGGTGGCGAGCTCCCATTGGTCAGCCTCGCAGGCCAAGATGTCACCGATGCTTTCCTTGCTTTCCACCCTAAGCACGCCTTCCACCACCTTGACACCTTCTTCACAGGCTGTTACCTCAGTGACCACCATGTCTCCGAGGTCTCAAGGGACTACAGGAACATGCTCTCTCACCTCACCAAAATGGGGCTGTTTGAGAAAAAGGATCGTGGTCTTTTCGTTGCCCTTTCGTTCATCCTGTTGCTTTTTTGTGCCATTGTTTATGGTGTCTTGTGTTCTGACAGCGCTTTCTTGCACGTGGGGTGTGGAGGGCTGATGGGGTTCTTGTGGATTCAAAGTGGCTGGATTGGACATGATTCTGGTCACTATAAGATTGTTTCAAACAAGGGTCTGAACAGGTTTTTTCAGATCCTGTCTGGGAATTGTCTTGCTGGGATCAGCATTGGTTGGTGGAAGTGGAACCACAATGCTCACCACATTGCTTGTAATAGCCTTGACTTTGATCCTGATCTTCAGCACTTGCCTTTCTTTGTTGTGTCATCAAGGTTCTTTAGCTCACTCTTTTCTTGCTTCTACGGGAGGAAGTTGAAATTTGATGCTTTTGCTAGGTTCTTGGTTAGTTACCAGCATTGGACTTTTTACCCTGTGATGTGCTTTGCTAGGATCAATTTGTTTGCACAGTCTTTTATACTGTTGTTCTCTAAGAGGAAGGTGCCTGATAGAGGGGTTGAGCTTTTTGGGATGCTCGTTTTCTGGGTTTGGTACCCTTTATTGGTTTCTTGTTTGCCTAATTGGGGTGAGAGGATGTTGTTTGTTGTGACTAGTTTTTCTGTCACTGGAATTCAGCATATTCAGTTCTGTTTGAACCATTTCTCATCCAAGGTGTATGTTGGTCCTCCAACTGCAACTGATTGGTGTGAGAAGCAGACTAATGGGACTCTTGATGTTGAGTGTTCTTCTTGGATGGATTGGTTTCATGGCGGGTTGCAATTTCAGGTGGAACACCATCTCTTTCCAAGGCTGCCCAGGTGCCATCTCAGGAGAATCTCGCCTTTGGTCAAGGATCTGTGCAAGAAACACAATCTTCCTTACAATTGTGTCTCATTCTGGAAGGCCAATGAACTGACACTTCAGACGCTCAGGAATGCAGCATTGCAGGCTCGCGATCTTTCCAATCCCATTCCCAAGAATCTGGTTTGGGAAGCTGTTAATACTCATGGATGA 1389 0.4629 MAEQETPSPPPPPPPPPPPTKYISLEQLSKHNTKEDLWISIHGKVYNASTWLQHHPGGELPLVSLAGQDVTDAFLAFHPKHAFHHLDTFFTGCYLSDHHVSEVSRDYRNMLSHLTKMGLFEKKDRGLFVALSFILLLFCAIVYGVLCSDSAFLHVGCGGLMGFLWIQSGWIGHDSGHYKIVSNKGLNRFFQILSGNCLAGISIGWWKWNHNAHHIACNSLDFDPDLQHLPFFVVSSRFFSSLFSCFYGRKLKFDAFARFLVSYQHWTFYPVMCFARINLFAQSFILLFSKRKVPDRGVELFGMLVFWVWYPLLVSCLPNWGERMLFVVTSFSVTGIQHIQFCLNHFSSKVYVGPPTATDWCEKQTNGTLDVECSSWMDWFHGGLQFQVEHHLFPRLPRCHLRRISPLVKDLCKKHNLPYNCVSFWKANELTLQTLRNAALQARDLSNPIPKNLVWEAVNTHG* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1903 462 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 16 99 IPR036400 -
Dod08g1903 462 CDD Delta6-FADS-like 155 417 - -
Dod08g1903 462 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 20 104 IPR001199 -
Dod08g1903 462 SMART Cyt_b5_2 23 95 IPR001199 -
Dod08g1903 462 MobiDBLite consensus disorder prediction 1 20 - -
Dod08g1903 462 PIRSF FA_sphingolip_des 1 449 IPR012171 GO:0016491
Dod08g1903 462 Gene3D - 17 93 IPR036400 -
Dod08g1903 462 PANTHER DELTA(8)-FATTY-ACID DESATURASE 2 20 461 - -
Dod08g1903 462 Pfam Cytochrome b5-like Heme/Steroid binding domain 24 91 IPR001199 -
Dod08g1903 462 PANTHER FATTY ACID DESATURASE 2 20 461 IPR012171 GO:0016491
Dod08g1903 462 SUPERFAMILY Formin homology 2 domain (FH2 domain) 9 229 - -
Dod08g1903 462 Pfam Fatty acid desaturase 159 421 IPR005804 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1903 Dod-Chr8 45539326 45544138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1903 21 462 Lipid Metabolism Gene Families AT2G46210 63.122 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1903 K21737 - ini:109158482 732.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1903 08 45539326 45544138 Dod08g1903 08 45539326 45544138 ECH