Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1897 ATGGAAACCATTGCAGAGGATTCATCCTCTAACAGCATCAATGGCATCGAATATGGGGTACCTGAAAACCAGCCTTACCGAACTTGGTACCACTTTCAGCCCCCACAAAATTGGATGAACGGACCAATGTACTACAAAGGAATTTACCATTTTTTCTACCAACATAATCCATATGCACCAATCTTTGGTAAGAAAATGGTATGGGGTCACTCTGTATCCTACGATCTCATAAATTGGAATCATCTAAATCATGCTCTTGAACCAAGTGATCACTATGACATTCATGGCTGCTATTCTGGCTCAGCTACAATCCTCCCTGGGGAAGAAAATGCTCTTATTTTGTACACAGGCTCAGATGCCAACAAACATCAAGTTCAGAACTTGGCTATGCCAAAAGATCCATTAGACCCTTTCCTACGGGAATGGATCAAACACCCTCAAAACCCTATCATGACTCCACCTGATGGAGTTGAGGAGGGAAATTTTAGAGATCCAACAACAGCCTGGCTAGGTGGTGATGGTAAATGGAGAGTGATAATTGGTGCTAAGAATGGTGATGAAGGGAAGGCAATTCTCTACCACAGTGAGGATTTTGCTAATTGGACATTAAATCCTATACCCTTATATGTACTTGACAATATTGGAATGTGTGAGTGCCCAGATTTCTTTCCAGTGTCCATAAACAGCACCAATGGGGTTGATACATCTGTCCAAGATTCTAGTGTTAAGCATGTCTTGAAGATAAGCTACCAAAGCAAACAACAAGAGTACTATTTGATTGGTAAATATCTTTCTGATGAGGACAAGTTTGTTACTCAAAACAAAATTACAGGAACCAGTTTGGATTTAAAATTGGACCATGGTGAATTTTATGCTTCCAAGTCATTTTTTGACTATGCCAAGAAGAGGAGGATATTTTGGGGATGGGCAAAAGAGTTAGACACCGAACAAGATGATATTGAGAAAGGATGGGCTGGTTTACAGTCTATTCCAAGGCAAGTTTGGCTTGATACAAGTGGGAAGTGGCTAATGCAGTGGCCAATTGAAGAGGTAGAAAGACTCCGTGACAAGCAAGTCAGTGTACAGGGAAAGAAACTGGTTGGTGGAACAACTCTTGAAGTCTCAGGCATCACTGCATCACATGCTGATGTAGAAGTGTTGTTTGAGCTACCTGAGCTAGAAAATGCTGAGTGGTTAGACTCCAATGAAGTTGATCCCCAACTACTTTGCAGTGAAGAACATGCATCAAGAAGTGGCATAATAGGGCCATTTGGTTTGTTAGCTTTGGCTTCAAAGGATCTTAGAGAACAGACAGCAATCTTCTTCAGAATATATAGAACTCCCAATGGATATTCATGCTTGATGTGCAGTGACCTGAGCAGGTCTTCATTGAGGGCAGACCTTGATAAAATCACATATGCAACTATCTTTGACATAGATCCCAATCTTAAAACAATTTCACTTAGAAGCTTGATTGACCGGTCCATTATAGAGAGTTTTGGGGAGAAGGGGAGAGTTTGCATCACTAATAGAGTTTATCCCTCATTGGCTATAGATAAAGATGCACATCTTTATGTATTTAACAATGGAAGCCAAGATGTGCTCATCTCAAAACTGAATGCTTGGAGCATGAAGAAAGCAGAATTTGTTCATCACTGA 1659 0.4069 METIAEDSSSNSINGIEYGVPENQPYRTWYHFQPPQNWMNGPMYYKGIYHFFYQHNPYAPIFGKKMVWGHSVSYDLINWNHLNHALEPSDHYDIHGCYSGSATILPGEENALILYTGSDANKHQVQNLAMPKDPLDPFLREWIKHPQNPIMTPPDGVEEGNFRDPTTAWLGGDGKWRVIIGAKNGDEGKAILYHSEDFANWTLNPIPLYVLDNIGMCECPDFFPVSINSTNGVDTSVQDSSVKHVLKISYQSKQQEYYLIGKYLSDEDKFVTQNKITGTSLDLKLDHGEFYASKSFFDYAKKRRIFWGWAKELDTEQDDIEKGWAGLQSIPRQVWLDTSGKWLMQWPIEEVERLRDKQVSVQGKKLVGGTTLEVSGITASHADVEVLFELPELENAEWLDSNEVDPQLLCSEEHASRSGIIGPFGLLALASKDLREQTAIFFRIYRTPNGYSCLMCSDLSRSSLRADLDKITYATIFDIDPNLKTISLRSLIDRSIIESFGEKGRVCITNRVYPSLAIDKDAHLYVFNNGSQDVLISKLNAWSMKKAEFVHH* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1897 552 SMART glyco_32 31 504 IPR001362 GO:0004553|GO:0005975
Dod08g1897 552 Gene3D - 361 544 - -
Dod08g1897 552 Pfam Glycosyl hydrolases family 32 C terminal 350 543 IPR013189 -
Dod08g1897 552 Gene3D Glycosyl hydrolase domain; family 43 36 360 IPR023296 -
Dod08g1897 552 Pfam Glycosyl hydrolases family 32 N-terminal domain 31 347 IPR013148 -
Dod08g1897 552 SUPERFAMILY Arabinanase/levansucrase/invertase 22 348 IPR023296 -
Dod08g1897 552 CDD GH32_Fruct1-like 37 336 - -
Dod08g1897 552 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 21 551 - -
Dod08g1897 552 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV6 21 551 - -
Dod08g1897 552 SUPERFAMILY Concanavalin A-like lectins/glucanases 347 546 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1897 Dod-Chr8 45067688 45070738 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1897 43 549 Glycoside Hydrolase AT5G11920 55.361 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1897 K01193 - gmx:100806753 873.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1897 08 45067688 45070738 Dod08g1897 08 45067688 45070738 ECH