Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1894 ATGAAGAACTTAGCAGCACTACTATTATTACTTGGATTGCTTCCTTTTCTTGAAGCATTCCCAGATAGCATTAATTCTATCAAGTACAGGATACCTGAGAAAGAGCCTTACAGAACTTCTTTTCACTTTCAGCCTGCGAAAAATTGGATGAACGATCCAAATGCTCCAATGTACTATAAAGGTGTCTACCACCTCTTCTACCAACATAACCCTGATGCAGCAACCTTTGGAGAGAGGATTGTATGGGCTCACTCAGTATCCTATGATCTCATAAATTGGATTCATCTGAATAATGCTATCGAACCAAGTGAACCATTTGACATCAATAGTTGCTGGTCAGGCTCAGCCACCATACTCCCAGGTGAAAAACCCTTTATTTTGTACACAGGTATTGATGAAAACAAACACCAAGTCCAGAACTTGGCTATTCCAAAGAATGTATCAGACCCTTTCTTAAGGGAATGGATCAAACACCCTCAAAACCCTGTCATGACTCCACCAAGTGGAGTCGAACTGGACAATTTTAGAGACCCTTCAACTGCTTGGTTGGGAAGTGATGGAAAATGGAGGGTGGTCATTGGTGCTCAAAATGGAGATGAAGGGAAGGCTATTCTCTACCAAAGTGAAGATTTTGTTGATTGGAAAGTGGATCCCAATCCATTTTATGCATCAGATAACACTGGAGTTTGTGAATGCCCGGACTTCTTTCCAGTGTCCATCAATAGCACAAATGGGGTGGATACATCTGACCAAAGTCCTAGTGTTAGGCTTAGGCATGTCTTGAAGATAAGCTACCTTAGCCGGCACCATGACTACTATTTTCTTGGCAATTATGCCTCTGATCAGGAAAACTTTGTTCCTGATCTTAAATTCACGGGAACTAGTTCAGACTTAAGGTATGACTATGGCAAGTTTTATGCTTCCAAGTCATTCTTTGACTATGCCAAGAACAGGCGAATATTGTGGGGATGGGTGAATGAATCTGACACCACACGAGATGATATTGAGAAAGGTTGGGCTGGTCTACAGTCTGTTCCAAGGAAAATTTGGCTTGATAAAAGTGGGAAGCGATTGGTCCAATGGCCAATTGAGGAGGTTGAAAAACTACATGTCAAGCAAATCAGTATTACCAAAGAGAAACTCCTTAGTGGGTCAACTCTTGAAGTCTCAGGCATCACTGCATCACAGGCTGATGTGGAAGTGGTGTTTGAGATACCTCAACTAGAAAGTGCAGAGTGGTTAGATCCCAATGTGATTGATCCCCAACTACTTTGTAGCAAAGAACATGCAACAGGAAGTGGCACAATAGGACCATTTGGTTTGTTAGCTTTAGCTTCAGAGGATCTCACTGAGCAGACAGCAGTGTTCTTCCAAATATATAAAGCTGACAACAGATATGTAGGCCTAATGTGCAGTGACCAAAGCAGGTCTTCATTGCGCCAAGATCTTGATAAAACCCCATATGGAACTTTCTTTGACATAGATCCCAATCTAAAAACAATTTCACTCAGAACCTTGATTGACCACTCCATTATTGAGAGTTTTGGGGATGAAGGGAGAGTTTGCATCACTAGTAGAGTTTATCCCTTGCTAGCTATTGACAAAGAGGCTCATCTTTATGTATTTAACAATGGAACTAAGAGTATAGTAATCTCAAAACTGAAAGCTTGGAGCATGAAGCAAGCGGAGATTGGCCATGAGGGAAGCATAAGCTGTGCTTGA 1722 0.4164 MKNLAALLLLLGLLPFLEAFPDSINSIKYRIPEKEPYRTSFHFQPAKNWMNDPNAPMYYKGVYHLFYQHNPDAATFGERIVWAHSVSYDLINWIHLNNAIEPSEPFDINSCWSGSATILPGEKPFILYTGIDENKHQVQNLAIPKNVSDPFLREWIKHPQNPVMTPPSGVELDNFRDPSTAWLGSDGKWRVVIGAQNGDEGKAILYQSEDFVDWKVDPNPFYASDNTGVCECPDFFPVSINSTNGVDTSDQSPSVRLRHVLKISYLSRHHDYYFLGNYASDQENFVPDLKFTGTSSDLRYDYGKFYASKSFFDYAKNRRILWGWVNESDTTRDDIEKGWAGLQSVPRKIWLDKSGKRLVQWPIEEVEKLHVKQISITKEKLLSGSTLEVSGITASQADVEVVFEIPQLESAEWLDPNVIDPQLLCSKEHATGSGTIGPFGLLALASEDLTEQTAVFFQIYKADNRYVGLMCSDQSRSSLRQDLDKTPYGTFFDIDPNLKTISLRTLIDHSIIESFGDEGRVCITSRVYPLLAIDKEAHLYVFNNGTKSIVISKLKAWSMKQAEIGHEGSISCA* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1894 573 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 32 567 - -
Dod08g1894 573 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV6 32 567 - -
Dod08g1894 573 Pfam Glycosyl hydrolases family 32 N-terminal domain 42 362 IPR013148 -
Dod08g1894 573 ProSitePatterns Glycosyl hydrolases family 32 active site. 42 55 IPR018053 GO:0004553|GO:0005975
Dod08g1894 573 SUPERFAMILY Concanavalin A-like lectins/glucanases 362 561 IPR013320 -
Dod08g1894 573 SUPERFAMILY Arabinanase/levansucrase/invertase 34 363 IPR023296 -
Dod08g1894 573 SMART glyco_32 42 519 IPR001362 GO:0004553|GO:0005975
Dod08g1894 573 Pfam Glycosyl hydrolases family 32 C terminal 366 558 IPR013189 -
Dod08g1894 573 Gene3D - 374 559 - -
Dod08g1894 573 CDD GH32_Fruct1-like 48 351 - -
Dod08g1894 573 Gene3D Glycosyl hydrolase domain; family 43 46 373 IPR023296 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1894 Dod-Chr8 45048444 45051981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1894 47 564 Glycoside Hydrolase AT1G55120 56.926 0.0 618
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1894 K01193 - gmx:100777487 956.822