Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1893 ATGCAAGGCCTACGCCGCTACCCAAACGACCTAGTCCAGCTGGACCTCGCAACAACCACAACCACAAACACATCATCGAACTCGCTCTCGATCGACGTCGAGGAATCAGTTGAGGAAAAGATCCAACGGCTGATAACTGAGCACCCAGTGATCATCTTCACGCGATCCTCGTGCTGCATGTGCCACGTCATGAAGAATCTACTCGCCACCATAGGAGTAAACCCCACCGTCATCGAATTGGACGATCACGAGATCGCCGCGCTCCCTCCTCCGTCGTCCTCGCCGTCGTCCTCCGCCGCCGCAGATGACGGCGGAAACAGCCTCCGCAACCGCGCGCCAGCCTTGTTCATCGGCGGCGCGTGCGTCGGTGGCCTCGAGTCGCTTGTCGGGCTCCACGTCAGCGGCCACCTTGTCCCCAAGCTCGTACAAGTCGGTGCTCTCTGGGTATGA 450 0.5978 MQGLRRYPNDLVQLDLATTTTTNTSSNSLSIDVEESVEEKIQRLITEHPVIIFTRSSCCMCHVMKNLLATIGVNPTVIELDDHEIAALPPPSSSPSSSAAADDGGNSLRNRAPALFIGGACVGGLESLVGLHVSGHLVPKLVQVGALWV* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1893 149 PANTHER GLUTAREDOXIN-C6 10 148 - -
Dod08g1893 149 TIGRFAM GlrX-like_plant: glutaredoxin-like family 41 149 IPR011905 -
Dod08g1893 149 ProSiteProfiles Glutaredoxin domain profile. 38 148 - -
Dod08g1893 149 SUPERFAMILY Thioredoxin-like 36 148 IPR036249 -
Dod08g1893 149 PANTHER GLUTAREDOXIN 10 148 IPR011905 -
Dod08g1893 149 Gene3D Glutaredoxin 31 148 - -
Dod08g1893 149 Pfam Glutaredoxin 50 85 IPR002109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1893 Dod-Chr8 45036273 45037823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1893 39 149 Miscellaneous Gene Families AT4G15660 40.517 3.38e-23 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1893 - - adu:107495514 222.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1893 08 45036273 45037823 Dod08g1893 08 45036273 45037823 ECH
Dod08g1893 08 45036273 45037823 Dod09g1969 09 41179168 41180519 PCT