Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1844 ATGTGTACTGGTGAGGAGAATGGCTTCGAATCTAGCTGCTTGAAGGACGGCGAAGGAGATGGTAGTGACATCTCAAAGGTAGAAGATCTAGAGGTCAGGATGGATCTCACGGATGACTTGTTGCACATGGTGTTTTCATTTTTGGATCATCCCAATCTCTGCAAAGCTGCCAGGGTTTGTAAGCAGTGGCGAACTGCTAGTGCTCATGAAGATTTTTGGAAGAGTTTGAATTTTGAAGATCGGAACATATCTGTTGAACAATTTGAAGACATGTGTAGGCGTTATCCTAATGCAACAGCAATGAGCATATCTGGTCCTGCTATATACTTGCTTGTCATGAAGGCTATCTCTTTATTAAGGAATCTTGAAGTTTTAACATTAGGAAGAGGACAGATAGCGGATACATTCTTTCATGCTTTAGCTGATTGTTCTATGTTGAAAAGATTAAATATCAATGATTCTACACTTGGCAATGGCATCCAGGAGATATCTATTAATCATGAAAGATTGTGTCATCTTCAATTAACAAAGTGCCGTGTGATGCGGATAGCTGTCAGATGCCCACAACTGGAAACTATGTCATTGAAGCGCAGTAACATGGCACAGGTCGTTCTTAGTTGCCCTCTTTTGCATGAGCTTGACATAGGCTCTTGCCACAAACTTCCTGATGCTGCGATTCGATCAGCTGCAACTGCATGCCCTCTACTAGCGTCTCTGGACATGTCTAATTGTTCATGTGTTAGTGATGAAACACTGCGTGAAATAGCGCAGAGCTGTGCTAACCTTAGTTTTCTTGATGCCTCGTATTGCCCAAACATATCGTTGGAGTCTGTTAGACTGCCAATGTTGACTGTTCTGAAGCTTCATAGTTGTGAGGGCATCACTTCTGCCTCAATGGCTGCAATAGCTTATAGTTATATGTTGGAGGTTTTGGAGCTTGACAATTGCAGTCTATTGACTTCAGTGTCTTTGGATCTACCACGTTTGCAGAACATTAGACTGGTACACTGTCGCAAATTTGCTGATTTGAACTTGAGAACTCTAATGCTTTCTTCTATACTGGTGTCCAACTGCCCTGCACTTCATCGTATCAACATCACCTCAGATTCACTCCAAAAATTACAGTTGCAAAAGCAAGATAGCTTGACCACATTAGCTCTGCAATGCCAATCTTTGCAAGAGGTCGACCTCTCAGAGTGTGAATCTTTGACAAATACGATATGTGATGTTTTTAGTGATGGTGGAGGATGTCCAATGTTGAAATCACTAGTTCTTGATAATTGTGAGAGTTTGACATCAGTTCGATTCTTCAGCACCTCTTTAGTCAGTCTTTCCCTTGCTGGTTGCCGTGCAATTACCACTCTTGAGCTCAAATGTCCTAAGCTTGAGAAAGTTACTTTGGATGGTTGTGATCATTTGGAAAGAGCATCATTTTGTCCTGTTGGTCTTCGGTCTCTCAATTTAGGAATATGTCCAAAATTGAATATACTCAGCATTGAAGCATCGTCTATGGTCTCACTTGAGTTGAAAGGATGTGGTGTACTATCTGAAGCATCCCTTATTTGTCCTCTGTTGACATCTCTGGATGCTTCCTTTTGCAGCCAACTCACCGATGATTGCTTGTCTGCAACAACCACCTCATGCCCACTGATCGAGTCGTTAATATTGATGTCTTGCCCTTCGATCGGTTTATATGGACTTTGTTCTCTGCAATTGCTTTCAAATTTGTCGCTTCTTGATTTATCATACACTTTCTTGGTGAACTTGCAGCCTATTTTTGAGTCTTGTTCACAGCTAAAGGTATTAAAGTTGCAGGCATGCAAATATCTCACTGACTCATCACTTGAACCTCTTTACAAGAGGGGTGCTTTACCAGCACTTCAGGAGCTGGACTTGTCTTATGGAACTCTCTGTCAGTCTGCCATAGAGGAGCTTCTCTCTTGCTGCACTCACCTTACGCGTGTAAGCTTGAATGGTTGTGTTAATATGCATGATTTAAATTGGGGATGCGGTCGTGGGCAGAATGCTGAGTTGCCAGGAGGAAATGTCCTATCTAGTTCAAGTTCCAATGAGATTATCCCTGAGTCAACTGAGCAGCCCACCCGTTTACTGCAGAATCTCTTCTGTGTAGGGTGTCCAAATATCAGGAAGGTTTTCATTCCGTTGACGGCACATTGTGCCAATTTATTAATCTTGAACCTTTCTCTATCAGCTAATTTGAAGGAGGTTGATGTTGCTTGTATGAACCTATGCTGGCTTAATTTAAGCAATTGTTCTGCTTTGGAAGTTTTGAAGCTAGAGTGCCCAAGATTGACCAGTCTCTTCCTTCAGGTTAACTAA 2340 0.4201 MCTGEENGFESSCLKDGEGDGSDISKVEDLEVRMDLTDDLLHMVFSFLDHPNLCKAARVCKQWRTASAHEDFWKSLNFEDRNISVEQFEDMCRRYPNATAMSISGPAIYLLVMKAISLLRNLEVLTLGRGQIADTFFHALADCSMLKRLNINDSTLGNGIQEISINHERLCHLQLTKCRVMRIAVRCPQLETMSLKRSNMAQVVLSCPLLHELDIGSCHKLPDAAIRSAATACPLLASLDMSNCSCVSDETLREIAQSCANLSFLDASYCPNISLESVRLPMLTVLKLHSCEGITSASMAAIAYSYMLEVLELDNCSLLTSVSLDLPRLQNIRLVHCRKFADLNLRTLMLSSILVSNCPALHRINITSDSLQKLQLQKQDSLTTLALQCQSLQEVDLSECESLTNTICDVFSDGGGCPMLKSLVLDNCESLTSVRFFSTSLVSLSLAGCRAITTLELKCPKLEKVTLDGCDHLERASFCPVGLRSLNLGICPKLNILSIEASSMVSLELKGCGVLSEASLICPLLTSLDASFCSQLTDDCLSATTTSCPLIESLILMSCPSIGLYGLCSLQLLSNLSLLDLSYTFLVNLQPIFESCSQLKVLKLQACKYLTDSSLEPLYKRGALPALQELDLSYGTLCQSAIEELLSCCTHLTRVSLNGCVNMHDLNWGCGRGQNAELPGGNVLSSSSSNEIIPESTEQPTRLLQNLFCVGCPNIRKVFIPLTAHCANLLILNLSLSANLKEVDVACMNLCWLNLSNCSALEVLKLECPRLTSLFLQVN* 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1844 779 SUPERFAMILY RNI-like 483 779 - -
Dod08g1844 779 SUPERFAMILY F-box domain 34 85 IPR036047 GO:0005515
Dod08g1844 779 PANTHER OS10G0396666 PROTEIN 26 778 - -
Dod08g1844 779 Gene3D Ribonuclease Inhibitor 279 437 IPR032675 -
Dod08g1844 779 Gene3D Ribonuclease Inhibitor 438 583 IPR032675 -
Dod08g1844 779 Gene3D Ribonuclease Inhibitor 29 278 IPR032675 -
Dod08g1844 779 Gene3D Ribonuclease Inhibitor 584 677 IPR032675 -
Dod08g1844 779 MobiDBLite consensus disorder prediction 1 20 - -
Dod08g1844 779 Pfam F-box-like 38 78 IPR001810 GO:0005515
Dod08g1844 779 ProSiteProfiles F-box domain profile. 30 76 IPR001810 GO:0005515
Dod08g1844 779 SUPERFAMILY L domain-like 115 512 - -
Dod08g1844 779 PANTHER OS10G0396666 PROTEIN 26 778 IPR044703 GO:0010252|GO:1905393
Dod08g1844 779 SMART LRR_CC_2 417 447 IPR006553 -
Dod08g1844 779 SMART LRR_CC_2 389 414 IPR006553 -
Dod08g1844 779 SMART LRR_CC_2 207 232 IPR006553 -
Dod08g1844 779 SMART LRR_CC_2 233 258 IPR006553 -
Dod08g1844 779 SMART LRR_CC_2 596 621 IPR006553 -
Dod08g1844 779 SMART LRR_CC_2 143 166 IPR006553 -
Dod08g1844 779 SMART LRR_CC_2 459 484 IPR006553 -
Dod08g1844 779 SMART LRR_CC_2 548 573 IPR006553 -
Dod08g1844 779 SMART LRR_CC_2 649 680 IPR006553 -
Dod08g1844 779 SMART LRR_CC_2 280 305 IPR006553 -
Dod08g1844 779 SMART LRR_CC_2 326 351 IPR006553 -
Dod08g1844 779 SMART LRR_CC_2 522 547 IPR006553 -
Dod08g1844 779 SMART fbox_2 36 76 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1844 Dod-Chr8 43192917 43203184 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1844 - - gmx:100782842 1346.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1844 08 43192917 43203184 Dod08g1844 08 43192917 43203184 ECH