Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1830 ATGGATTTCAGGGTGATGAGTTTGGATCCTGCATTGTTCCACACACTTCACCATCACACCATGGACCCATCGGAAGAAGACAAGACACACCATGCTCCAACAAGAGCATACGTACAAGACGCAAAGGCAATGGCTTGTACTGCTGCAGACATCAAGGAATATCCGAATTCCTATGTGTTTGTCATAGACATGCCGGGGTTGAAATCTGGGGACATAAAGGTTCAGGTGGAAGATGATAGGGTGCTTGTGATAAGCGGCGAGAGGAAGAGGGAGGAAGAGAAAGAGGGTGCCAAGTACTTGAGGATTGAGAGAAGGTTTGGAAAATTCATGCGCAAGTTTGTGCTTCCTGAGAATGCAAACACTGATGCTGTCTCTGCTGCGTGCCAAGATGGTGTGTTAACTGTTACCGTGCAGAAGCTGCCTCCTCCTCAGCCTAAGAAACCAAAGACCATTGAGGTTAAGACCTGTTGA 471 0.4756 MDFRVMSLDPALFHTLHHHTMDPSEEDKTHHAPTRAYVQDAKAMACTAADIKEYPNSYVFVIDMPGLKSGDIKVQVEDDRVLVISGERKREEEKEGAKYLRIERRFGKFMRKFVLPENANTDAVSAACQDGVLTVTVQKLPPPQPKKPKTIEVKTC* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1830 156 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 40 154 IPR002068 -
Dod08g1830 156 SUPERFAMILY HSP20-like chaperones 18 148 IPR008978 -
Dod08g1830 156 PANTHER 18.0 KDA CLASS II HEAT SHOCK PROTEIN 9 154 - -
Dod08g1830 156 Gene3D - 9 154 IPR008978 -
Dod08g1830 156 Pfam Hsp20/alpha crystallin family 50 154 IPR002068 -
Dod08g1830 156 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 9 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1830 Dod-Chr8 42981332 42981802 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1830 K13993 - gmx:100500666 226.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1830 08 42981332 42981802 Dod08g1830 08 42981332 42981802 ECH