Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1819 ATGGCGGCAGCCGCTGCGGTCCCCGGCGGCGCTCTGACGGCGCATGAGCGGCTGATTCTGACGGCGGTGAACGCTGGAGCGTCGAGCCTGTCGTTGGCGGGGTCCAGCTTCATCGTGCTCTGTTACCTCCTCTTCAAGGAGCTTCGCAAGTTCTCCTTCAAGCTCGTCTTCTACCTTGCACTCTCCGATATGCTTTGCAGTTTCTTCAGCATAGTAGGGGACCCATCCAAAAGTTTCTTTTGTTATGCTCAGGGCTATAGCACACATTTCTTTTGCGTGGCATCTTTCCTATGGACTACAACAATTGCTTTTACCCTGCATCGTACTGTTGTTAAACACAAAACAGATGTTGAAGATTTGGAGGCCATATTTCACTTGTATGTCTGGGGTACTTCCCTGGTCATGACAGTTATGCGCTCCTTTGGTAATGACCATAGACATTTTTCTGCATGGTGTTGGACTCAAACAGGTCTCACAGGGAAGGCAGTTCATTTTGTAACATTTTACGTTCCACTCTGGGGTGCAATTTTATATAATGGGTTCACATACTTTCAAGTAATACGCATGCTGAATAATGCGACCCGTATGGCAGTTGGTATGTCAGGCCAAGCTTATGTCTCAGATGCAAGAGATAACATGAGGGCTCTAAATCGCTGGGGATACTATCCTCTGATTCTGATAGGATCATGGGCTTTTGGCACCGTTAACCGTATTCATGATTTTTTTGAACCAAACCATAAGGTCTTCTGGCTCTCATTTCTTGATGTTGGAACGGCTGCTCTTATGGGCCTCTTTAACTCAATTGCATATGGCCTTAATTCTTCTGTTCGTCGGGCAATTTGTGAAAGACTGGACAAGTTCTGGCCTGAAAGACTGAACAGATGGCTCCCTAACAATTTCAAGTACAATAACTTACAGCAAGAAAGTGAATTAGTCTTGTTAGAAAATGAAGATCAGCATTAG 963 0.4559 MAAAAAVPGGALTAHERLILTAVNAGASSLSLAGSSFIVLCYLLFKELRKFSFKLVFYLALSDMLCSFFSIVGDPSKSFFCYAQGYSTHFFCVASFLWTTTIAFTLHRTVVKHKTDVEDLEAIFHLYVWGTSLVMTVMRSFGNDHRHFSAWCWTQTGLTGKAVHFVTFYVPLWGAILYNGFTYFQVIRMLNNATRMAVGMSGQAYVSDARDNMRALNRWGYYPLILIGSWAFGTVNRIHDFFEPNHKVFWLSFLDVGTAALMGLFNSIAYGLNSSVRRAICERLDKFWPERLNRWLPNNFKYNNLQQESELVLLENEDQH* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1819 320 Pfam Slime mold cyclic AMP receptor 28 274 - -
Dod08g1819 320 PRINTS GCR1-cAMP receptor family signature 222 240 IPR022343 -
Dod08g1819 320 PRINTS GCR1-cAMP receptor family signature 50 65 IPR022343 -
Dod08g1819 320 PRINTS GCR1-cAMP receptor family signature 254 273 IPR022343 -
Dod08g1819 320 PRINTS GCR1-cAMP receptor family signature 81 99 IPR022343 -
Dod08g1819 320 PRINTS GCR1-cAMP receptor family signature 31 49 IPR022343 -
Dod08g1819 320 ProSiteProfiles G-protein coupled receptors family 2 profile 2. 20 274 IPR017981 GO:0004888|GO:0007166|GO:0016021
Dod08g1819 320 PANTHER G PROTEIN-COUPLED RECEPTOR 157-RELATED 11 303 - -
Dod08g1819 320 PRINTS Putative plant GPCR, GCR1, signature 264 280 IPR022340 -
Dod08g1819 320 PRINTS Putative plant GPCR, GCR1, signature 160 172 IPR022340 -
Dod08g1819 320 PRINTS Putative plant GPCR, GCR1, signature 246 263 IPR022340 -
Dod08g1819 320 PRINTS Putative plant GPCR, GCR1, signature 98 116 IPR022340 -
Dod08g1819 320 PRINTS Putative plant GPCR, GCR1, signature 216 237 IPR022340 -
Dod08g1819 320 PRINTS Putative plant GPCR, GCR1, signature 121 136 IPR022340 -
Dod08g1819 320 PRINTS Putative plant GPCR, GCR1, signature 53 75 IPR022340 -
Dod08g1819 320 PRINTS Putative plant GPCR, GCR1, signature 173 196 IPR022340 -
Dod08g1819 320 PRINTS Putative plant GPCR, GCR1, signature 20 35 IPR022340 -
Dod08g1819 320 PRINTS Putative plant GPCR, GCR1, signature 37 51 IPR022340 -
Dod08g1819 320 PRINTS Putative plant GPCR, GCR1, signature 83 96 IPR022340 -
Dod08g1819 320 PANTHER TRANSMEMBRANE PROTEIN 116 11 303 - -
Dod08g1819 320 Gene3D - 14 296 - -
Dod08g1819 320 SUPERFAMILY Family A G protein-coupled receptor-like 15 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1819 Dod-Chr8 42756763 42763532 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1819 K22987 - gmx:100794547 593.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1819 08 42756763 42763532 Dod08g1819 08 42756763 42763532 ECH