Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1780 ATGCAGGAGGAGGAAACTAAGGAAGATCCGTTTGGTGAATCTCTAGAGGGAAATGAATCCACAAAGGGGATTTTGGGTTGTTTGTACATTCCCTTTAGTTGGTTTAGCATGCTTTCAAGGGAAATGCATTGGAGCTTTGTGTTTGCATTGGTTGTTGTTAATGGAATAAGTCAAGGGCTAGGTGATGCTCTTTCAGATGTTGGCACTAACTATTACATGAAAGATACTCTGAAGGTGCAGCCATCTGAAGCACAGGTTTATCAAGGGATCATATCCATTCCTTGGCTTGTCAAGCCTCTATGGGGCCTTCTCACTGATGTTGTCCCAGTTTTTGGATACCGGAGACGACCTTACTTCATTTTTGCGGGTTTCTTAGGAGTGATTTCCATGTTTTTGTTATCTTTGCATGAAAACTTGCATCTTGTGTTGGCAATTTTATCATTGACAGCTGGAAATGCTGGGGGGGCAATAGCGGATGTAACCATTGATGCCTGTGTGGCTGAGAAGAGTATCTCTCATCCTTCACTTGCTCCTGACATGCAAAGTTTATGCGCCTTCAGTAATTCTGTTGGAGCACTATTAGGATTCTCCATTAGTGGTATCTTTGTTCACCTTATAGGCCCTATGGGTGTGTTTCGTGTGATGACTATTCCGGCTGGTATTGTAATTTTGGTTGGTTTTTTGCTTGATGAGCCTCGTACGCACAACATTTCTCATAGACAGGTGAACCAAAAGTTTATTGATGCTGGCAAGGTTATGTGGACCACAATGAAGAGCAAAGATGTTTGGAGGCCTTGCTTATTCATGTACTTATCCCTTGCATTGAGTTTGGATATCGTTGAAGGAATGTTCTATTGGTATACAGATTCAAAGGATGGCCCATCTTTCTCCGAGGAAAGCGTTGGTTTTATACATGCAATTAGTTCAGTGGGATCCCTTTTGGGTGCAATACTATACCAGTATGTTCTAAAGGATTATGCATTTAGAGACTTGCTCTTTTGGGCCCAATTGTTGTATGGTTTGTTAGGGATGTTTGATCTGGTTTTGGTCTTGAGATGGAACATGAAGTTTGGTATATCTGACTATTTCTTTGTTGTGATGGTTGAAAGCATTACTCAAATGATTTATAGGCTTAAGTGGATGCCTATGCTTGTGCTTAGCACAAAACTTTGCCCCTCAGGCATTGAAGGCACTTTCTTTGCCTTGCTTATGTCAATTGATAATGTTGGACTTCTCTCATCTTCATGGGGTGGTGGTTTTGTGCTCAAGATACTAAAGGTTACAAGAACAAGGTTTGATAATCTTTGGTTAGCTATTTTGATCCGGAACATTTTGAGAATTGCTCCACTATGCATGCTGTTTTTGGTGGCTAGAGCTAATCCAAACTCTTTGATTGGTCCGAGTGAAAGCCTGGACTCAAAGGCAAATATTGACACTTCAGAATCCAAGAATGTTGAATTGGTCTCCCTTGTAAGCAGTGTTGAAGGTAAACAGGCAGCTATATTGACACTTCATGGAGCTCGTCCATGA 1530 0.4131 MQEEETKEDPFGESLEGNESTKGILGCLYIPFSWFSMLSREMHWSFVFALVVVNGISQGLGDALSDVGTNYYMKDTLKVQPSEAQVYQGIISIPWLVKPLWGLLTDVVPVFGYRRRPYFIFAGFLGVISMFLLSLHENLHLVLAILSLTAGNAGGAIADVTIDACVAEKSISHPSLAPDMQSLCAFSNSVGALLGFSISGIFVHLIGPMGVFRVMTIPAGIVILVGFLLDEPRTHNISHRQVNQKFIDAGKVMWTTMKSKDVWRPCLFMYLSLALSLDIVEGMFYWYTDSKDGPSFSEESVGFIHAISSVGSLLGAILYQYVLKDYAFRDLLFWAQLLYGLLGMFDLVLVLRWNMKFGISDYFFVVMVESITQMIYRLKWMPMLVLSTKLCPSGIEGTFFALLMSIDNVGLLSSSWGGGFVLKILKVTRTRFDNLWLAILIRNILRIAPLCMLFLVARANPNSLIGPSESLDSKANIDTSESKNVELVSLVSSVEGKQAAILTLHGARP* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1780 509 CDD MFS_FBT 49 454 - -
Dod08g1780 509 PANTHER FOLATE-BIOPTERIN TRANSPORTER 2-RELATED 18 495 - -
Dod08g1780 509 TIGRFAM fbt: folate/biopterin transporter 39 461 IPR004324 GO:0016021
Dod08g1780 509 Gene3D MFS general substrate transporter like domains 37 445 IPR036259 -
Dod08g1780 509 PANTHER FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC 18 495 IPR039309 -
Dod08g1780 509 SUPERFAMILY MFS general substrate transporter 46 457 IPR036259 -
Dod08g1780 509 Pfam BT1 family 58 225 IPR039309 -
Dod08g1780 509 Pfam BT1 family 267 459 IPR039309 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1780 Dod-Chr8 42276566 42281176 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1780 - - ccaj:109816000 784.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1780 08 42276566 42281176 Dod08g1780 08 42276566 42281176 ECH