Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1757 ATGCAACGGTTAAAAACTCTGCTACCAGAAAAATGTAGGTTCTCTCTTCGCACACTAACCTCTCATCGTCGAGCTTTCACTGCTCAACCAAGTCACGTGCACCACCACATTCATGATCACGATGATGATCCCCAACAACAGATTTTAGTCGAAGGAAGAGCGAAATCGAGAGCAGCAATTCTCAACAGGCCATCTTCTCTGAATGCTGTCATCACTTCAATGGTTGCTAGGCTGAAGAGGTTGTATGATTCGTGGGAAGAGAACTCTGACATTGGCTTTGTGTTGATGAAGGGTAGTGGCAGAGCTTTCTGTTCTGGTACAGATGTTGTTAGGCTGTATAATACACTGAATGAAGGAAATGCTGAAGAAGCTGAGCAGTTTTTCAGAACATTATATTCATTTGTATATCTTCAAGGGACATATCTTAAGCCACATGTTGCTATTTTGGATGGAATAACAATGGGATGTGGAGGTGGAATTTCTCTTCCAGGGATGTACCGTGTCGTGACTGATAGAACTATTTTTTCTCACCCAGAGGCTCAAATAGGTTTCCACCCTGATGCGGGAGCTTCTTATTATTTATCTCGTCTACCTGGATACCTGGGGGAGTACTTGGCCCTTACAGGAGATAAGCTTAATGGTGTAGAAATGATTGCCTGTCGCCTTGCTACTCACTTTTCACTAAATGCTAGGCTTCCTTGGCTTGAAGAACGCCTTGGTAAACTAATCACAGATGATCCTTCTGTTGTGGAGGCATCCCTTGCACAGTATGGTGATCTTGTTTACCCAGACAGAAGCAGTGTCCTTCAAAAGCTTGGTACTATTGATAGATGTTTTAGTCACGATACAATGGAGGAAATTGTTGAAGCATTGGAGAAGGAGGCAGCTGAGTCTTATGATGAATGGTGTATAACAACTCTTAAGAGGATGAAAGAAGCTTCCCCGTTGAGTTTGAAAGTTATTTTGCAATCTATACGTGAAGGTAGATTTGAAACACTTGATCAATGTCTGGTACGCGAGTACCGGATATCCCTGCGCACAATTTCTAAGCAGGTCTCCTCTGATTTCTTTGAGGGTGTTCGAGCACGAATGGTTGATAAAGATTTTGCACCCAAGTGGGATCCACCTAGTTTAAAAGATGTATCAGACGACATGGTTGAACGTCACTTCTCTCCGTTTAACGAAGTAGAATCTGAATTGGTGCTGCCAACGGCATTGCGAGAACCTTACACGTGA 1236 0.4312 MQRLKTLLPEKCRFSLRTLTSHRRAFTAQPSHVHHHIHDHDDDPQQQILVEGRAKSRAAILNRPSSLNAVITSMVARLKRLYDSWEENSDIGFVLMKGSGRAFCSGTDVVRLYNTLNEGNAEEAEQFFRTLYSFVYLQGTYLKPHVAILDGITMGCGGGISLPGMYRVVTDRTIFSHPEAQIGFHPDAGASYYLSRLPGYLGEYLALTGDKLNGVEMIACRLATHFSLNARLPWLEERLGKLITDDPSVVEASLAQYGDLVYPDRSSVLQKLGTIDRCFSHDTMEEIVEALEKEAAESYDEWCITTLKRMKEASPLSLKVILQSIREGRFETLDQCLVREYRISLRTISKQVSSDFFEGVRARMVDKDFAPKWDPPSLKDVSDDMVERHFSPFNEVESELVLPTALREPYT* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1757 411 Gene3D - 42 405 - -
Dod08g1757 411 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 2, MITOCHONDRIAL 22 410 - -
Dod08g1757 411 Coils Coil 281 301 - -
Dod08g1757 411 CDD crotonase-like 61 225 - -
Dod08g1757 411 SUPERFAMILY ClpP/crotonase 58 376 IPR029045 -
Dod08g1757 411 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 22 410 IPR032259 GO:0003860
Dod08g1757 411 Pfam Enoyl-CoA hydratase/isomerase 58 390 IPR045004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1757 Dod-Chr8 41848116 41855148 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1757 20 410 Acyl Lipid Metabolism Gene Families AT4G31810 69.797 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1757 K05605 - gmx:100808892 691.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1757 08 41848116 41855148 Dod08g1757 08 41848116 41855148 ECH