Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1721 ATGACGGGCGTCACAATCGTATGCCAGTTAGTTAAACCGGGTGTGGCACCTTCGTACTCGTCGCCCACTGTTCTCTCTCCCTCTCCGTGGCTTCATTCTATCTTCACTCCTTTAACTTATTATTCTCTCTCTAAAGCTCGCTTTAATATCATATTGACCTCTTCACTCTTCAACCCCAAATTCGTTTCGATGGCATCTTCAGTGCTCTCCGTAGCTTCACGCGGTGTCTCTCCCTGTGCTTCCCTGTCTATCCACGAAACGCACAAGGGGAAGGCCAAGCTTGGAGGAAGTGGTTTGAGGTTTAGCAAGGAAGGACCCAATCCCTTCTCAAATTCAAAGTCATCTGGTCGGATCTCTATGACTGTTGCGGTTAACATTTCTCGATTTGAGGGCATTCCAATGGCTCCTCCTGATCCAATTCTTGGAGTTTCTGAAGCATTTCGAGCTGACACAAGTGATGTCAAGCTCAATCTTGGAGTTGGGGCCTACAGGACAGAAGAACTACAGCCATATGTTCTCAATGTTGTTAAGAAGGCAGAGAATCTTATGCTGGAGAGAGGGGAGAACAAAGAGTATCTCCCTATTGAGGGTTTGGCTGCATTCAATAAGGCAACTGCAGAGCTGTTACTTGGGGCAGACAACGCAGCAATCAAAGAACAAAGAGTTGCGACTGTCCAAGGTCTTTCTGGAACTGGTTCTCTGAGACTAGGAGCAGCTCTGATAGAACGATATTTTCCTGGGGCAAAAGTTTTGATATCGGCTCCTACCTGGGGTAATCACAAGAATATTTTCAATGATGCTAGGGTTTCATGGTCTGAGTACCGATATTATGATCCCAGGACAGTTGGTTTGGATTTTGAGGGCATGATAGAAGATATAGAGGCAGCTCCTGAAGGAACTTTTGTGCTGCTTCATGGATGTGCTCATAACCCTACTGGTATTGATCCAACACCTGAACAGTGGGAAAAAATAGCAGATGTAATTCAACAGAAGAACCACATTCCATTTTTTGATGTTGCTTACCAGGGGTTTGCTAGTGGAAGCCTTGATGAAGATGCAGCATCTGTTAGATTGTTTGTGGCACGAGGCATGGAGGTTCTTGTTGCTCAATCATACAGTAAAAATCTTGGTCTATATGCTGAAAGGATTGGAGCAATTAATGTTATTTCCTCATCGCCTGAATCTGCAGCCAGGATAAAGAGCCAATTGAAGAGGCTTGCACGACCAATGTACTCTAATCCACCTATTCACGGGGCTAGGATTGTTGCCAATGTTGTTGGAAATCCTGCTCTCTTCGATGAATGGAAAGCAGAGATGGAAATGATGGCTGGAAGGATAAAGAAAGTTAGACAGAGGCTATATGATAGTATTTCTTCAAAAGACAAGAGTGGAAAGGATTGGTCATTCGTACTTAAGCAGATAGGCATGTTCTCATACACAGGCTTGAACAAGAACCAGAGTGACAATATGACAAATAAGTGGCATGTATACATGACAAAGGATGGAAGGATTTCCCTGGCAGGATTGTCATTGGCCAAATGTGAATACCTGGCTGATGCTATTATTGATTCATTTCATAATGTCAGCTGA 1590 0.4403 MTGVTIVCQLVKPGVAPSYSSPTVLSPSPWLHSIFTPLTYYSLSKARFNIILTSSLFNPKFVSMASSVLSVASRGVSPCASLSIHETHKGKAKLGGSGLRFSKEGPNPFSNSKSSGRISMTVAVNISRFEGIPMAPPDPILGVSEAFRADTSDVKLNLGVGAYRTEELQPYVLNVVKKAENLMLERGENKEYLPIEGLAAFNKATAELLLGADNAAIKEQRVATVQGLSGTGSLRLGAALIERYFPGAKVLISAPTWGNHKNIFNDARVSWSEYRYYDPRTVGLDFEGMIEDIEAAPEGTFVLLHGCAHNPTGIDPTPEQWEKIADVIQQKNHIPFFDVAYQGFASGSLDEDAASVRLFVARGMEVLVAQSYSKNLGLYAERIGAINVISSSPESAARIKSQLKRLARPMYSNPPIHGARIVANVVGNPALFDEWKAEMEMMAGRIKKVRQRLYDSISSKDKSGKDWSFVLKQIGMFSYTGLNKNQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSFHNVS* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1721 529 Pfam Aminotransferase class I and II 155 521 IPR004839 GO:0009058|GO:0030170
Dod08g1721 529 SUPERFAMILY PLP-dependent transferases 127 523 IPR015424 -
Dod08g1721 529 Gene3D - 187 428 IPR015421 GO:0003824
Dod08g1721 529 CDD AAT_like 156 521 - -
Dod08g1721 529 PANTHER ASPARTATE AMINOTRANSFERASE 73 527 IPR000796 GO:0006520|GO:0008483
Dod08g1721 529 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 371 384 IPR004838 GO:0003824|GO:0009058|GO:0030170
Dod08g1721 529 Gene3D Aspartate Aminotransferase, domain 1 132 521 IPR015422 GO:0003824
Dod08g1721 529 PANTHER ASPARTATE AMINOTRANSFERASE, CYTOPLASMIC 73 527 - -
Dod08g1721 529 PRINTS Aspartate aminotransferase signature 302 321 IPR000796 GO:0006520|GO:0008483
Dod08g1721 529 PRINTS Aspartate aminotransferase signature 401 426 IPR000796 GO:0006520|GO:0008483
Dod08g1721 529 PRINTS Aspartate aminotransferase signature 333 345 IPR000796 GO:0006520|GO:0008483
Dod08g1721 529 PRINTS Aspartate aminotransferase signature 470 488 IPR000796 GO:0006520|GO:0008483
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1721 Dod-Chr8 40931327 40935817 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1721 K00811 - gmx:547792 832.017