Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1717 ATGGAACCGGAAGTTACCATCGAGGGCTCCTCCATGATCCAGGTGGCGGTCCTTCCCATAGGGACCGTGCCCCCTAACGCGCTGCGGGACTACTACACCATGCTGCTCCCGCTGCACACGATCCCTCTCTCCGCCATCAGCTCCTTCTACACGGAGCACCAGAAGTCCCCCTTCGCACACCAGCCCTGGGACTCCGGCTCCCTCCGCTTCAAGTTCGTCCTCGGCGGCGCTCCGCCGTCCCCTTGGGAGGACTTCCAGTCCCACCGCAAGACCCTCGCCGCCGTCGGCATCTGCCACTGCCCTTCCTCCCCCGATCTCGGCACCGTCATCGGCCAGTTCTCCGCCGCCTGCAGGTCTTACCCTTCCTCCCTTGTCCATCGCTGCTTTGCGTTCTGCCCGGACGATTCCCAGCTTGAGGAAGGAGGAAAGAATGGGGGGAATTTGAGGTTGTTTCCACCTGCAGATCGTCCAACATTGGAGTTTCACTTGAACACGATGATGCAAGAAATAGCGGCATCACTGCTCATGGAATTTGAGAAATGGGTGCTTCAGGCGGAGTCTTCTGGAACCATACTCAAGACACCATTGGATTCTCAAGCTAGTCTCAGCTCAGAGGAGGTTATCAAGGCCAAAAAGAGGAGGCTTGGGCGTGCACAGAAGACCATAGGTGATTACTGCTTGCTGGCAGGGTCCCCGGTTGATGCCAATGCTCATTATACTACTGCGTTGGAACTTGCCAGGTTGACCACGGATTACTTCTGGTATGCGGGAGCATTGGAGGGTAGCGTTTGTGCCTTGCTGATTGACCGTATGGGCCAGAAAGATTCAGTTTTGGAGGAGGAAGTTAGATATCGTTATAATAGTGTCATCTTGAATTATAAGAAGTCACAAGATAATGCACAGAGAGTTTCTCCAATAACTTTTGAACTCGAAGCTACTTTGAAATTAGCAAGGTTTCTTTGCAGGAGAGAGCTAGCCAAGGAGGTGGTGGAGTTGTTGACCACTGCTGCAGATGGAGCTAAATCTTTAATTGATGCTAGTGACAGACTCATATTATATATTGAAATAGCTCGTTTATATGGAAGTATTGGGTATCAGAGAAAAGCTGCTTTTTTTTCTAGGCAGGTTGCTCAGTTATATCTGCAGCAAGAAAATAGGTTGGCTGCGATTAGCGCTATGCAAGTTTTGGCAATGACCACAAAAGCTTATCATGTTCAAAGTAGAGCATCAGTCTCGGATCATTCTCAGCAAAATAAGGGAAATGGAGATAGTGGGAAAACATATCACCAATCAGCAGTCTCACTATTTGAGTCCCAATGGAGTACTCTTCAGATGGTTGTACTGAGAGAAATTCTTCTTTCAGCAGTTCGTTCTGGAGATCCTCTTACTGCATGGAGTGCAGCAGCCCGACTCCTTAGACACTACTATCCTCTAATAACTCCTGCTGGTCAAAATGGCCTTGTTAATGCACTTTCAAATTCAGCAGAGAGGCTGCCACCAGGGACTCGTTGTGCTGATCCTGCTTTGCCTTTTATAAGGTTGCATTCTTTTCCTCTCCACCCAATACAAATGGACATTGTAAAACGCAATCCAGGTAGAGAAGACTGGTGGGCAGGTGCTGCTCCTTCAGGCCCCTTCATTTATACACCATTCAGTAAAGGAGAGCCAAATAATGCTAAGAAACAAGAGCTTATTTGGATTGTTGGAGAGCCTGTCCAGGTCTTGGTGGAATTAGCAAACCCGTGTGGCTTTGAATTAAGAGTTGATAGCATATATCTATCTGTACATTCAGGAAACTTTGATGCTTTCCCAATGAGTGTAAGCCTTTTACCCAATTCATCAAAAGTAATCACCTTATCAGGCATTCCAACAGCAGTGGGGCCAGTTACAATTCCTGGGTGCATTGTTCATTGTTTTGGTGTCATTACTGAACACCTGTTTAGAGAGGTTGACAATCTGCTTCTTGGGGCCACACAAGGGCTTGTCCTTTCTGATCCTTTCCGAAGTTGTGGATCTCCAAAGTTGAAGAATGTATCTATTCCAACTATTTCTGTAGTACCACCACTTCCCTTGTTGGTATCACATGTTGTCGGAGGTGATGGTGCCGTCATTTTGTATGAAGGTGAAATTCGTGATATATGGATAAGTCTGGCTAATGCGGGCACAGTTCCAATTGAGCAGGCACATATTTCACTGTCTGGGAAAAATCAAGATTCTGTGATTTCGTATTCTAGTGAGACTTTAAACTCTTGTCTTCCTTTAAAGCCTGGTGCAGAAGTGACAATCCCTGTGACCTTGAGAGCCTGGCAGGTTGGATTAGTGGATGCTGATACTGGTGCAGGGAGGACTGTCTCTGGAAGCAGCATGAGGCATTTCAAAGACGGAAGCAGCCCATCATTGTTGATCCACTATGCTGGACCACTACGAACCTCTGAAGATCCCAAGACAAATGGATCTGTGCCTCCGGGTAGACGTCTTGTTGTGCCCCTGCAGATTTGTGTTCTGCAGGGTTTGTCTTTTGTAAAGGCTCAGCTGCTTTCCATGGAATTTCCTGCTCATGTTGGTGAAAATCTTCCCAAGGTGGATGATATAAATAATGAGTCTGCTGCAGGACATTTTGACTCTCCAACAAACATGGACAGATTGGTGAAGATAGATCCTTTCAGAGGCAGTTGGGGACTCAGATTTCTTGAACTCGAGTTGTCTAACCCAACTGAAGTAGCATTTGAAATCAACGTCTCCGTCAAATTGGACAACTCTAGCAATGAGGATAATCATATTTCTGATCAGGATGCTACTGAATATGGATATCCTAAGACAAGAATTGATAGAGATTGCTCCGCAAGGGTTCTAGTGCCTCTTGAGCATTTTAAATTACCTGTTCTTGATGATTCCTTTTTTATGAAGGACACTCACGCAGATGGGAGAAATGCATCCTTGTCTGAAAAGAACACCAAAGCTGAACTCAATGCTTGTATCAAGAACCTTATCTCTAGGATCAAGGTTCAGTGGCATTCAGGACGCAATAGCTCTGGGGAGTTGAATATCAAGGATGCTATCCAGGCAGCCTTGCAGACATCAATCATGGATGTCCTGCTGCCTGATCCACTGACATTCGGCTTCAGGCTAGCTAGGGAGGATTTCGAATCAGAAAAACCTGATCCTGATAAAGAATCTAATGTCGTCAAATCCCCTGCTTCCAAAGGTTCTGTGCTTGCACATGAAATGACACCAATGGAGGTTCTGGTTCGAAATAACACGAAGGATATGATCAAAATGAGTCTTAATATTACATGCAGAGATGTTGCTGGGGAAAATTGTGTTGATGGTACCAAGGCGACTGTTCTATGGACTGGTGTTCTGAGTGATATCACTGTGGAAATTCCCCCACTTCAACAAATCAAACATTCTTTCTGCCTGCATTTTCTTGTCCCAGGAGAGTACACGCTGGTTGCGGCTGCAGTGATTGATGATGCAAATGACATCCTTCGGGCTCGAGCAAAAACCACTTCGGCTGCTGAGCCGATTTTCTGCCGTGGACCACCGTATCGCGTCCGTGTTCTTGGAACTGCGTGA 3576 0.4662 MEPEVTIEGSSMIQVAVLPIGTVPPNALRDYYTMLLPLHTIPLSAISSFYTEHQKSPFAHQPWDSGSLRFKFVLGGAPPSPWEDFQSHRKTLAAVGICHCPSSPDLGTVIGQFSAACRSYPSSLVHRCFAFCPDDSQLEEGGKNGGNLRLFPPADRPTLEFHLNTMMQEIAASLLMEFEKWVLQAESSGTILKTPLDSQASLSSEEVIKAKKRRLGRAQKTIGDYCLLAGSPVDANAHYTTALELARLTTDYFWYAGALEGSVCALLIDRMGQKDSVLEEEVRYRYNSVILNYKKSQDNAQRVSPITFELEATLKLARFLCRRELAKEVVELLTTAADGAKSLIDASDRLILYIEIARLYGSIGYQRKAAFFSRQVAQLYLQQENRLAAISAMQVLAMTTKAYHVQSRASVSDHSQQNKGNGDSGKTYHQSAVSLFESQWSTLQMVVLREILLSAVRSGDPLTAWSAAARLLRHYYPLITPAGQNGLVNALSNSAERLPPGTRCADPALPFIRLHSFPLHPIQMDIVKRNPGREDWWAGAAPSGPFIYTPFSKGEPNNAKKQELIWIVGEPVQVLVELANPCGFELRVDSIYLSVHSGNFDAFPMSVSLLPNSSKVITLSGIPTAVGPVTIPGCIVHCFGVITEHLFREVDNLLLGATQGLVLSDPFRSCGSPKLKNVSIPTISVVPPLPLLVSHVVGGDGAVILYEGEIRDIWISLANAGTVPIEQAHISLSGKNQDSVISYSSETLNSCLPLKPGAEVTIPVTLRAWQVGLVDADTGAGRTVSGSSMRHFKDGSSPSLLIHYAGPLRTSEDPKTNGSVPPGRRLVVPLQICVLQGLSFVKAQLLSMEFPAHVGENLPKVDDINNESAAGHFDSPTNMDRLVKIDPFRGSWGLRFLELELSNPTEVAFEINVSVKLDNSSNEDNHISDQDATEYGYPKTRIDRDCSARVLVPLEHFKLPVLDDSFFMKDTHADGRNASLSEKNTKAELNACIKNLISRIKVQWHSGRNSSGELNIKDAIQAALQTSIMDVLLPDPLTFGFRLAREDFESEKPDPDKESNVVKSPASKGSVLAHEMTPMEVLVRNNTKDMIKMSLNITCRDVAGENCVDGTKATVLWTGVLSDITVEIPPLQQIKHSFCLHFLVPGEYTLVAAAVIDDANDILRARAKTTSAAEPIFCRGPPYRVRVLGTA* 1192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1717 1191 MobiDBLite consensus disorder prediction 1049 1068 - -
Dod08g1717 1191 PANTHER TRAPP II COMPLEX, TRS120-RELATED 1 1189 - -
Dod08g1717 1191 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 201 270 IPR013935 -
Dod08g1717 1191 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 10 191 IPR013935 -
Dod08g1717 1191 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 327 738 IPR013935 -
Dod08g1717 1191 PANTHER TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 9 1 1189 IPR013935 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1717 K20306 - gmx:100784850 2123.59