Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1706 ATGTCTTCCTTCTCCACTCTCAGGAGATTCTCACCGTTCGCCCACCGTTTCCCAATCCAACGGTCCCTGATCCGCCACTCTTCAAGTTCACCATCTTCTTCTTCTTCTTCTTCTCTGCTGAAGCGTGACACCAACCAACACCCCAGTCCGGGTTCCAGGCTGGGCCCGAAGTGGGCTTTGGCCGTTGCCGCGGGCACGGGCCTAGGGCTTCTCCTGCATACCCTCTCTAAGCCCAATTCCCAATTCAACCCTGTTTCACTGCCTTTCGTTGACTGGAGGTCAAAGCCTGAAGACGAAGTTGGACCCGAGCGTTGTTCTACCCCGTCCTTCTTTACAAAACTCTCTCTTCCTGAAAGTAGTGGTTCCTTGCTCTTTAGAGAGGCTTACAGGAGAAAGGTGTTTTTCAACTATGAGAAGCGGATACGGTTGCGAAGTCCACCGGAAAAGGTTTTTGAATACTTTGCATCTTATCGTACTCCAGAAGGAGAAATACTCATGAAACCAGCAGATCTAATGCGAGCAGTCGTTCCTGTTTTCCCTCCATCTGAATCCCACCTTGTTAGAGATGGATACTTGAAAGGAGAAAGAAGTCCTGGTCATTTACGCTGTGCTCCTTCAGAATTTTTTATGCTATTTGATGTCAATGGTGACGGGCTTATATCTTTTAAAGAGTACATCTTTTTTGTAACACTACTCAGCATCCCCGAGTCAAGCTTTTCTATAGCATTCAAAATGTTTGATGTGGACAATAGTGGGGAGATAAATAAGGAAGAATTCAAGAAAGTGATGGCCTTGATGCGATCTCATCATCGACAAGGTGTTCAGCACAGGGATGGACTGCGAATTGGCCTAAAGGTGAATGATTCTGTGGAAAATGGAGGGCTGGTGGAGTACTTTTTTGGTAAAGATGGAAATGAATGCCTCCAACTTGATAAATTCGTACAGTTTTTGAGAGACTTGCAAGATGAAATTGTGAGACTGGAGTTTGCTCATTATGACTACAAATCTCGTAAAACCATATCGGCCAAGGACTTTGCACTCTCCATGGTTGCTTCTGCTGACATGACCCATCTAGACAGGTTGCTTAAGCGGGTTGATGAGTTGAACAATGATCCACGCTTCAAGGATGTACGCATCACATTTGAAGATTTCAAAGGCTTTGTTGAGCTACGGAAAAAGTTGTTACCATTTTCATTGGCGCTTTTCAGTTTTGGAAAAGTAAATGGTCTGTTAACCAGAGATGATTTTCAGCGAGCTGCATCACAAGTCTGCGGCATATCTCTCTCTGACAGTGTGGTTGAGATCGTTTTCCAGTTGTTCGACACAAATCGGGATGGAAACCTAAGTTCAGATGAGTTTGTGAGAGTGCTGCACAAGCGAGAAAGGGACATTGTACAACCTATGGAGACAGGAATCTTGTCCTGTTGCTGGAACTGTAAGGATAGTCTCTCATGTTTGCGGTTGTTTGCCTGA 1473 0.4521 MSSFSTLRRFSPFAHRFPIQRSLIRHSSSSPSSSSSSSLLKRDTNQHPSPGSRLGPKWALAVAAGTGLGLLLHTLSKPNSQFNPVSLPFVDWRSKPEDEVGPERCSTPSFFTKLSLPESSGSLLFREAYRRKVFFNYEKRIRLRSPPEKVFEYFASYRTPEGEILMKPADLMRAVVPVFPPSESHLVRDGYLKGERSPGHLRCAPSEFFMLFDVNGDGLISFKEYIFFVTLLSIPESSFSIAFKMFDVDNSGEINKEEFKKVMALMRSHHRQGVQHRDGLRIGLKVNDSVENGGLVEYFFGKDGNECLQLDKFVQFLRDLQDEIVRLEFAHYDYKSRKTISAKDFALSMVASADMTHLDRLLKRVDELNNDPRFKDVRITFEDFKGFVELRKKLLPFSLALFSFGKVNGLLTRDDFQRAASQVCGISLSDSVVEIVFQLFDTNRDGNLSSDEFVRVLHKRERDIVQPMETGILSCCWNCKDSLSCLRLFA* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1706 490 MobiDBLite consensus disorder prediction 24 55 - -
Dod08g1706 490 CDD EFh_MICU 239 460 - -
Dod08g1706 490 SUPERFAMILY EF-hand 325 462 IPR011992 -
Dod08g1706 490 Gene3D - 295 398 - -
Dod08g1706 490 Pfam EF-hand domain pair 409 458 IPR002048 GO:0005509
Dod08g1706 490 Pfam EF hand 242 265 IPR002048 GO:0005509
Dod08g1706 490 ProSiteProfiles EF-hand calcium-binding domain profile. 428 463 IPR002048 GO:0005509
Dod08g1706 490 PANTHER CALCIUM UPTAKE PROTEIN, MITOCHONDRIAL 1 488 - -
Dod08g1706 490 ProSitePatterns EF-hand calcium-binding domain. 247 259 IPR018247 -
Dod08g1706 490 Gene3D - 172 271 - -
Dod08g1706 490 SUPERFAMILY EF-hand 207 459 IPR011992 -
Dod08g1706 490 SMART efh_1 204 232 IPR002048 GO:0005509
Dod08g1706 490 SMART efh_1 432 460 IPR002048 GO:0005509
Dod08g1706 490 SMART efh_1 238 266 IPR002048 GO:0005509
Dod08g1706 490 ProSitePatterns EF-hand calcium-binding domain. 441 453 IPR018247 -
Dod08g1706 490 ProSiteProfiles EF-hand calcium-binding domain profile. 234 269 IPR002048 GO:0005509
Dod08g1706 490 PANTHER EF HAND DOMAIN FAMILY A1,A2-RELATED 1 488 IPR039800 GO:0005509|GO:0006851
Dod08g1706 490 MobiDBLite consensus disorder prediction 24 51 - -
Dod08g1706 490 Gene3D - 407 467 - -
Dod08g1706 490 CDD EFh 207 264 IPR002048 GO:0005509
Dod08g1706 490 Pfam EF hand 208 225 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1706 Dod-Chr8 40580353 40586535 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1706 57 425 EF-hand Containing Proteins AT4G32060 65.147 1.88e-169 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1706 K22827 - gmx:100806575 652.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1706 08 40580353 40586535 Dod08g1706 08 40580353 40586535 ECH