Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1700 ATGGAGACTCCGAGTAGGATCTTCTTCTCTGCAACTCTCTCGCTCCTCCTCGTTTCGTTCGTCGTCGTTGTTCTGCTTCCGAGTCAGTTATTCGAATTCGTGACATCGTCACTCTCTAGCTCGAGGCCTGGATTCTCCGTTCCAACGGATCTTCTGATCCGAACGAAGTTTTCCGGCGAGAATAATCAGCTCCTGGCAGTCGAACACGCCGGCGGTGTTCACCGGAAAAAATCCAGAGACAGAACATCCACGAGGAAAGTGAGAAGAGTTGAAGAAGGACTTGCAGGAGCGAGAGCTTCAGTGCGGAAGGCAGCATCGAAAGATGAGAGAAGGAATGTCACTTTCGCAACAACCACCGCACACAGCAGCAGCGACGAGGACGACGGCGACCGCTACATTCCCGCCGGAGCTGTGTATCGTAACCCCCGCTTGTTTTACCGGAGTTACTTGGAAATGGAGAAAATATTCAAGGTGTACGTATACCCAGATGGGGACCTACCAATCACTCATGACGGCCCGTGCAAGGACATATACTCAATTGAGGGAAGATTCATCCATGAGATGGAGCATGGTGGTGGGAGGTTTAGGACCAATGATCCCAATTTGGCTCATGTTTACTTCTTGCCATTCAGTGTGACTTGGATGGTCAAGTACCTCTACACTCCAATGTCTTACAATGTCACACCTTTAAAGCAGTTCGTCTCTGATTATGTGAGAGTGGTATCCACTAGGTACCCCTTTTGGAATAGAACTCATGGAGCCGATCACTTCATGCTAGCGTGTCATGATTGGGGTCCTCATGCATCACAGGGCAACTCTTTCCTCTACAATACCTCCATCCGTGTCTTGTGCAATGCCAACACAACAGAGGGCTTCAAACCTGGAAAAGATGTATCACTACCGGAAATCCACCTCTTCGGAGGTGAAGTATCACCCAAACTCCTTTCACCCCCAAAAGACACCACCCCACGTCCCTATCTTGCCTTCTTTGCCGGTGGTGTTCATGGCCCGATCCGACCCAAACTCCTCCACCATTGGAAAAACAGTGACAATGATATTGTTGTCTATGAGTACCTCCCAAAAGGCCTAGACTACCACTCCTTCATGCTCAGCTCCAAGTTCTGCCTTTGTCCAAGTGGTTACGAAGTTGCCAGCCCCAGAATAGTTGAGTCAATTTATGCAGAATGTGTTCCTGTGATCATATCAGAGCACTATGTGCTGCCCTTTAGTGATGTGCTGCGATGGGAGGCGTTTTCAGTGCATCTTGATGTTTCGGATATTCCAAGGTTGAAAGAGGCTCTTAGTGCAATTCCAGAGGATAGGTATTGGATGCTCAAGCAAGGTGTAAGGGCTGTTAGGAGACATTTTACACTGAATCAGCCAGCTAAGAGATATGATGTATTTCACATGATCTTACACTCTATATGGCTAAGGAGATTAAATATAGAACTCAGATAG 1458 0.4794 METPSRIFFSATLSLLLVSFVVVVLLPSQLFEFVTSSLSSSRPGFSVPTDLLIRTKFSGENNQLLAVEHAGGVHRKKSRDRTSTRKVRRVEEGLAGARASVRKAASKDERRNVTFATTTAHSSSDEDDGDRYIPAGAVYRNPRLFYRSYLEMEKIFKVYVYPDGDLPITHDGPCKDIYSIEGRFIHEMEHGGGRFRTNDPNLAHVYFLPFSVTWMVKYLYTPMSYNVTPLKQFVSDYVRVVSTRYPFWNRTHGADHFMLACHDWGPHASQGNSFLYNTSIRVLCNANTTEGFKPGKDVSLPEIHLFGGEVSPKLLSPPKDTTPRPYLAFFAGGVHGPIRPKLLHHWKNSDNDIVVYEYLPKGLDYHSFMLSSKFCLCPSGYEVASPRIVESIYAECVPVIISEHYVLPFSDVLRWEAFSVHLDVSDIPRLKEALSAIPEDRYWMLKQGVRAVRRHFTLNQPAKRYDVFHMILHSIWLRRLNIELR* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1700 485 Pfam Exostosin family 154 436 IPR040911 -
Dod08g1700 485 PANTHER XYLOGALACTURONAN BETA-1,3-XYLOSYLTRANSFERASE 72 482 - -
Dod08g1700 485 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 196 465 - -
Dod08g1700 485 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 72 482 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1700 Dod-Chr8 40453802 40461184 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1700 - - adu:107495288 739.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1700 08 40453802 40461184 Dod08g1700 08 40453802 40461184 ECH
Dod08g1700 08 40453802 40461184 Dod09g0872 09 28327140 28328908 PCT