Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1687 ATGGATGCAAATAACCTACCTGCTGATGGGCTTGAAGTGGTACACCAAAATGGTGTTTATGATGAAACTTCTATGTCAGGAGAGAATGGTGTTGGTTCAAATGATGTAGACACCAGTGTTACTGGAAGTACAGAAGCTGTAGCCCCAAATGGAAATTTTGAAAATTCCAACCAGCCAGAGAGCACTACAGCTGATAACTCATCTGTGGGAGAAAATCAAGGATCAAATGATTATGGAAATAATGTGACTGTTTCTAAGGAAGAGGAAGTGAAAACAGATCAAACACAGCAATCAAAACCACAAAAGGGTCCTGTCAAGAATGACAATGCAAAGGCCCCAAGTTCTAGAGGTGTACGTGCAAGATTGGTGAAAAGGGGAAAAGAAGGAAAAGATGAAGAGGCCACATCTGCTGTTTCAAATGGCACTTCAACTCGCCCACGACAGTTTACTAAAACCAGATCAAACGATAGACCGAATCAATCGTCCAAGCACATTCCAAAGTCTGAAGCAGCCTCTTCTGAAGTAACCATGGAGAAGACAAAACCAAAACCATTTAAAAAAGGACCCCTCGATAAAGTTCAAGGAGAAATGGAATCTTCATTAAGTACCGGAGCAGACGATGCCAAACCTCGCAGGGCGGGGACACTTCCAAATTATGGATTCAGTTTCAAATGTGGTGAACGAGCTGAGAGAAGAAAAGAGTTCTACACTAAGCTTGAGGAAAAGATTCATGCTAAGGAGGTGGAGAAGAGTAACTTGCAAGCAAAAACCCAGGAAACTCAAGAAGCCGAGATTAAGATGCTTAGGAAGAGTCTAGCATTTAAAGCAACTCCAATGCCAAGTTTCTACCAAGAGCCTTCTCCTCCTAAAGTGGAGCTAAAGAAGATACCAACTACAAGAGCAAAATCTCCCAAGCTAGGTCGTAAGAAGGGCTCAACAAATTCAGAGTCAGATGGAAACACCAGCAGCAGTTCTCAACCAGGTCGTCTAAGTCTGGATGAAAAGGCGTCTCAGAGTAACACCATTAAAGGAATTGCTCCATCCTATCAAAAGAAGCCGCAACGAAAATCTCTTCCTCCCCGACTAGCTTCCGAAAGGATAAGTTCATCCAAATCAACAACTGCACCCACTTCATTGAAGGCAGTGAATGATGAGAAGACCTCATCTAGTGCAACAAATAGTGGTACCAGCTTATCTAATGCTACCAGAGAAGAGAAAGTTGAGATGTCCACAGCCAATGAAGAGAACAGTATCCTGTCCAGCAAGAAAAGTGAAGCTCTGGCTTCGAATGCGGTTCCTTCAGATAAGCCAATTGAAGCAGAACCTCAAGTGAATGGCAATATAGCAGTTGAAGAGAATCCCCAGCCCAACTTGGTGCAAGAACCGGTTGTGGCAGAGCATTAA 1404 0.4323 MDANNLPADGLEVVHQNGVYDETSMSGENGVGSNDVDTSVTGSTEAVAPNGNFENSNQPESTTADNSSVGENQGSNDYGNNVTVSKEEEVKTDQTQQSKPQKGPVKNDNAKAPSSRGVRARLVKRGKEGKDEEATSAVSNGTSTRPRQFTKTRSNDRPNQSSKHIPKSEAASSEVTMEKTKPKPFKKGPLDKVQGEMESSLSTGADDAKPRRAGTLPNYGFSFKCGERAERRKEFYTKLEEKIHAKEVEKSNLQAKTQETQEAEIKMLRKSLAFKATPMPSFYQEPSPPKVELKKIPTTRAKSPKLGRKKGSTNSESDGNTSSSSQPGRLSLDEKASQSNTIKGIAPSYQKKPQRKSLPPRLASERISSSKSTTAPTSLKAVNDEKTSSSATNSGTSLSNATREEKVEMSTANEENSILSSKKSEALASNAVPSDKPIEAEPQVNGNIAVEENPQPNLVQEPVVAEH* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1687 467 Coils Coil 236 256 - -
Dod08g1687 467 MobiDBLite consensus disorder prediction 363 428 - -
Dod08g1687 467 Pfam Targeting protein for Xklp2 (TPX2) domain 221 292 IPR027329 -
Dod08g1687 467 MobiDBLite consensus disorder prediction 1 222 - -
Dod08g1687 467 PANTHER PROTEIN WVD2-LIKE 5-RELATED 1 457 - -
Dod08g1687 467 MobiDBLite consensus disorder prediction 308 347 - -
Dod08g1687 467 PANTHER PROTEIN WVD2-LIKE 4 1 457 IPR044833 GO:0008017
Dod08g1687 467 MobiDBLite consensus disorder prediction 174 193 - -
Dod08g1687 467 MobiDBLite consensus disorder prediction 19 83 - -
Dod08g1687 467 MobiDBLite consensus disorder prediction 135 156 - -
Dod08g1687 467 MobiDBLite consensus disorder prediction 276 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1687 Dod-Chr8 39973315 39977773 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1687 - - gmx:100786958 555.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1687 08 39973315 39977773 Dod08g1687 08 39973315 39977773 ECH
Dod08g1687 08 39973315 39977773 Dod09g0906 09 28803334 28807689 PCT