Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1656 ATGAGATCTGTTCGGCGGTGGTGGGATCTGAAGGTGCAGGGTTGGTTGTGTAGATTCGAAGGCTCCGCCGCACAGGGTTGGCTGTGGAAGATCTTATGGCGAGATCTGAAGGTGCTGCCGTACGAGGTTGGCTGTGCAAGATTTGAAGGCGAGGCTGCACGAGGGTGGCTGTGCGAGTTCTGGTTGAGCGAACGAAGATGTGCAAGCTTGGGCTTCCAGTCACAGCCAAACACAATTTCTCTTGATATGAGAGTGATGTCTAGAACAAAGAAGGAGGAAAGCAATAATAAGAAGGAGCATGTGCATGCACAATCCAATATTATTGTGATCAATTATTGTAATATAAGACATGATATTCGTTCACATGACAATAAATCCAGGTACAGAGGACGCGGGAGAGGATTCTCCGGGCGCGCCTACTCCGGCGGGAGGGGGCAGTACGTCACCGGCGACGAGCACTTCCGGTCAGTCCGCGACGCCAATTTGGGACTCCGCCGAGGGGACAGAGGAAACTTCTCGAACCAAACAACACCGCCGCCGCAGCAGCAGCATCGTAATCCGCCTTATAATCCGAGACTGAGGGCTCCGCCACCGCTGCCGCACCTTCAGAACAGTCAATTCGGCCACCCTCCACCGCAGTTTCGGCCTCCGCCGTATGATCATAACAGGGCGGCGTTTCGTCCGCCGCGGCACCTTCGGCCTCGGCCTCCGGATTATCGAGACTGGGAGCTTGCAGTGGCGCCGCCGCCTCCCTCTGATTGTGAACGGTTTATAGTTCTTTCCTATAATGTATTGGCTAACTACCTTGCTTTGGACCACCGGAACAAACTATACTTTCACATACCACGTTACATGTTGGACTGGCAGTGGAGAAAAAAGAGTATAATTTTTGAGCTTGGGTTGTGGGCAGCAGATATCATGTGTTTACAGGAGGTTGACAGATTTAATGACTTGGCGGAGGAGTTGAAGCTTAAGGGGTATAGTGGCATTTGGAAGATGCGTACGGGCAATGCAGTTGATGGCTGTGCAATCTTTTGGCGAACATCAAGGTTCAGATTGTTATATGAAGAATCCATTGAGTTTAATAAGCTGGGACTTAGAGAAAATGTTGCTCAGATATGTGTACTAGAGTTCGTTAATCAAAATGAATCTCTCCCATCGAGCATGACAGGTTCCAGTAAAGTTGTTGTCTGTAACATTCATGTTCTATATAATCCTAATAGAGGAGAAATTAAGCTTGGCCAGGTCAGAGTTCTACTGGATAGGGCTAAAGCTGTTTCTGAGCTCTGGAATAATGCCCCTGTTGTTATCTGTGGGGATTTTAATTCCACCCCTAAGAGTCCATTGTACAACTTTATCTCAGAACAGAAGTTAGATTTATCTGGAATAGATAGGAATAAGGTATCAGGACAAGCTTCTGCTGTTATTCATGCACCAAGGATTTATGGTCCTAATACAAGTGACAGATCTGCTAATGGTTCAGTTCAGACCACAGCTATTATGGGTGACAAGGAATCTCAAACAAATATGCAGCATGAATTGGAGAGTGATGCATGCACAAGAAAGGATACTCAGGAGACGGCTGTATACCATTCTAAGACTTCTGATGAAGTAGATAGCAAAGAAGAGCCAAATCCTTCTTATACTGAAGGTAGTATGGAATGTGCAGAACATGTATCAGATGCTGTCTCAACTTCAAATCAAGAATCATTATGTGAAAAATCCAACTTACATGTTCCTGAGGGAAATAAATATGTGGAGTCTGACTGTTGCTCAACGTTTCTCCAAGAAGATGATCAATCTTCCAGTGTCAATAAAGAACATGAGTCAACAATTCTTCTCAATGTAGAAATTTCTTCAACTAAGCTATCCAGCCAGACTTCAGTTTCTGATTCTTGTGAAGAGCCTCATGCTGGAGAAAGCCCATCTGTTGAGCTCATCACTAATGACCAATTGAACAGCTCATCAACCTCATTACCAGTTGACAAATCACACCGATCCACCATCATTGACTTTCCACTAGATGAAAAACTAGAGAACCTGTTCCTTGATGAGATAGACGAAACCATCAGGGGCAGTGAAAATATTGGCGAAGATGACACTGCCTTCATATCTGCCTTACATGATGCTGAAGAAGGCTTCACCCTTGGTCTTGATCCATCAATGAAGTCAAATCTTGAAAAGTCATATCAGTTTGAGGAATTAGATTCTGCTTCCAACTTGGTGCCCACAGAAAGCAATGAATTGGATGATGACTTGTCTCCAAGTCCAGCTTTCAAATCTATGCATGCTGCGAAAACTACATATGATCCATCATTGTGGACCCCAATGGAGATAGAGACCGCAACAGGAAATGCAGAGAGCATGTTCTTGGAGCACCCATTGCCACTTACGAGCACATACACTGAAGCTATGGATTGTTCAGGGACTAGAGACCCGCATGGAGAGCCCCTGGTGACCAGCTACAATAGATGCTTCTTGGGCACTGTTGACTACATTTGGCGATCTGAAGGTCTGCAGACAACCAGAGTTCTTGCTCCAATACCTAAACAGGCCATGGAATGGACTCCGGGATTCCCAACAAAGAAATGGGGTAGTGATCATATTGCCTTGGTTTCTGAGTTGGCGTACTTGAAAGATGGTACCGAAATTCGCAGGGATGTTCAATAG 2670 0.4566 MRSVRRWWDLKVQGWLCRFEGSAAQGWLWKILWRDLKVLPYEVGCARFEGEAARGWLCEFWLSERRCASLGFQSQPNTISLDMRVMSRTKKEESNNKKEHVHAQSNIIVINYCNIRHDIRSHDNKSRYRGRGRGFSGRAYSGGRGQYVTGDEHFRSVRDANLGLRRGDRGNFSNQTTPPPQQQHRNPPYNPRLRAPPPLPHLQNSQFGHPPPQFRPPPYDHNRAAFRPPRHLRPRPPDYRDWELAVAPPPPSDCERFIVLSYNVLANYLALDHRNKLYFHIPRYMLDWQWRKKSIIFELGLWAADIMCLQEVDRFNDLAEELKLKGYSGIWKMRTGNAVDGCAIFWRTSRFRLLYEESIEFNKLGLRENVAQICVLEFVNQNESLPSSMTGSSKVVVCNIHVLYNPNRGEIKLGQVRVLLDRAKAVSELWNNAPVVICGDFNSTPKSPLYNFISEQKLDLSGIDRNKVSGQASAVIHAPRIYGPNTSDRSANGSVQTTAIMGDKESQTNMQHELESDACTRKDTQETAVYHSKTSDEVDSKEEPNPSYTEGSMECAEHVSDAVSTSNQESLCEKSNLHVPEGNKYVESDCCSTFLQEDDQSSSVNKEHESTILLNVEISSTKLSSQTSVSDSCEEPHAGESPSVELITNDQLNSSSTSLPVDKSHRSTIIDFPLDEKLENLFLDEIDETIRGSENIGEDDTAFISALHDAEEGFTLGLDPSMKSNLEKSYQFEELDSASNLVPTESNELDDDLSPSPAFKSMHAAKTTYDPSLWTPMEIETATGNAESMFLEHPLPLTSTYTEAMDCSGTRDPHGEPLVTSYNRCFLGTVDYIWRSEGLQTTRVLAPIPKQAMEWTPGFPTKKWGSDHIALVSELAYLKDGTEIRRDVQ* 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1656 889 Pfam Endonuclease/Exonuclease/phosphatase family 260 461 IPR005135 GO:0003824
Dod08g1656 889 MobiDBLite consensus disorder prediction 151 165 - -
Dod08g1656 889 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 6 134 878 - -
Dod08g1656 889 MobiDBLite consensus disorder prediction 181 198 - -
Dod08g1656 889 MobiDBLite consensus disorder prediction 124 234 - -
Dod08g1656 889 SUPERFAMILY DNase I-like 248 459 IPR036691 -
Dod08g1656 889 MobiDBLite consensus disorder prediction 508 544 - -
Dod08g1656 889 MobiDBLite consensus disorder prediction 503 562 - -
Dod08g1656 889 MobiDBLite consensus disorder prediction 625 648 - -
Dod08g1656 889 Gene3D Endonuclease/exonuclease/phosphatase 639 886 IPR036691 -
Dod08g1656 889 Gene3D Endonuclease/exonuclease/phosphatase 231 562 IPR036691 -
Dod08g1656 889 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 134 878 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1656 Dod-Chr8 39242443 39285450 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1656 288 456 EF-hand Containing Proteins AT5G54130 26.667 9.97e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1656 - - adu:107495335 1062.75