Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1647 ATGGCCACAAACCACTCTGAATCCAATGGAGACCAAAATCCTCGCCAAATGAATCTTCCCTTGGACTTCTCTTCAATAAAGTCATTACCCGATTCCCATGCATGGCCGGAATCTAATGATGACCAAATCATTGATGGAGCTGGATCCTCCATACCCATCATTGACCTCATGGATCCTAATGCAATGGAACTTATTGGCCTAGCATGTGAGAATTCGGGTGCCTTCCAATTGAAGAACCATGGCATACCCTTGAGTTTTATTGAAAAGCTTGAAGCAGAGACAAAACGGCTCTTTGATCTCCCAGCTGAACAGAAGTTGAAGGCTCTTAGATCCCTTGATTTCCCCACTGGATATGGCACTTTGTGGATATCACCTTCCTTCGAAAAGTTTATGTGGCATGAAGGATACACCATCACGGGTTCTGCCGTTGATGATGCTAAAAAGATTTGGCCTGATGACTATAAACGGTTTTGTGATGTGATGGAGAAATTCCAGGACCAATTGAGTGTATTGGTAGAAAAATTAATCCACTTGATATTCAAATTCTTGGGAATTTCTGAGGAAGAAAAGAATTGGGTTGGTTCAAACAACCACGTTGGATCTGTTCAGCTGAATTCCTTCCCTCCTTGTCCTGAGCCAGACCGAGCCTTGGGTATGGCCCCACACACAGACACTTCAATTTTCACTGTCCTTCACCAAAGCCTTTGCTCTGGCCTCCAAGTGTTCAAGAAAGGTGTTGGGTGGGTCAATGTGCCCCTTGACCCTAGTGCTCTTGTAGTTAACACTGGTGATGTTCTACCTATCTTGTCCAATGGAAGGCTCCATTCAGCACTACACAGAGTCATAGCAAACAAGGAACAAAGATACTCAATGGTTTATTTTTATAGGCCCACAATGGATAGTGTTGTTTCTCCTTTGGTTCATGACTCTGAGGCTCACTATCGTAGTTTGACTTTCAAGGAGTATGTTGGCATTAAGGACAAGCATTTGGAAAAAACACTATATGAGGAAAGAGGCTTCAACAGCGACGCACATGGCTGTTTCGCAATGGCAATCCTCGCAGCGGCACTTGCATCCTCACGGTGGGGCTTCGCAGTGGTTGCTCGAATACCGACCTCAACGTGGTGCTACAGACGCAACAATGGAGAGGAGATGAAGGCTAGCTCAGTGGCGTGCGACGTTGAGGTACATATGAGTGGAGGTCACGGTGGGTGA 1215 0.456 MATNHSESNGDQNPRQMNLPLDFSSIKSLPDSHAWPESNDDQIIDGAGSSIPIIDLMDPNAMELIGLACENSGAFQLKNHGIPLSFIEKLEAETKRLFDLPAEQKLKALRSLDFPTGYGTLWISPSFEKFMWHEGYTITGSAVDDAKKIWPDDYKRFCDVMEKFQDQLSVLVEKLIHLIFKFLGISEEEKNWVGSNNHVGSVQLNSFPPCPEPDRALGMAPHTDTSIFTVLHQSLCSGLQVFKKGVGWVNVPLDPSALVVNTGDVLPILSNGRLHSALHRVIANKEQRYSMVYFYRPTMDSVVSPLVHDSEAHYRSLTFKEYVGIKDKHLEKTLYEERGFNSDAHGCFAMAILAAALASSRWGFAVVARIPTSTWCYRRNNGEEMKASSVACDVEVHMSGGHGG* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1647 404 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 198 297 IPR005123 -
Dod08g1647 404 Pfam 2OG-Fe(II) oxygenase superfamily 203 297 IPR044861 -
Dod08g1647 404 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 20 333 - -
Dod08g1647 404 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 20 333 - -
Dod08g1647 404 Pfam non-haem dioxygenase in morphine synthesis N-terminal 51 152 IPR026992 -
Dod08g1647 404 SUPERFAMILY Clavaminate synthase-like 21 328 - -
Dod08g1647 404 Gene3D - 19 324 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1647 Dod-Chr8 38750165 38753161 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1647 51 322 Glycosyltransferase AT5G59530 29.866 1.17e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1647 K04124 - gmx:100808546 407.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1647 08 38750165 38753161 Dod09g0964 09 29861663 29863911 PCT