Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1613 ATGGCAATAGTTTCCAAGATATCATCATCACTAACATCATTATCATCACCCACACCCAAACTCATCAACCGCCTTAGACACCTCACTGCCCTCTCTTATTCTTCTTCGACGGTAAATGCCATCAGTAGTAGCAGAAGCGCGACCGTCACAAAGAAGCAGAAGCAAAAAGCAGCGTTGGCGAAAGAGAAGAGAAGGACCCGTTCCGACAAAGAGTTCGACAAGGACGCGATAATTGAGCGTTACCAATCTCATGTACCAGTCATGCTTGCCGAAGTCTTGGATGTTTTTGCCAACTGCTCATTGAGTTCTTTCGCCGATTGCACGCTTGGCGCTGCTGGCCATTCCTCTGCTGTGATTAGTGGCCATGGAGAGTTGAAGTATTTTGTTGGGATGGATGTGGATCCTGTGGCACATGACATGGCTCAAGCTCGGATCAATTCTGTGTTGCAAAATCCATTGGATGGGGGTGTCAAAGTGTTTACTTTACTCAGGAATTTTAGGCATATCAAGTCTGCACTTAGAGAAACTGGTGAGGAACCGTTAGTGGATGGTGGCCTTGACGGAATCTTAATGGACCTGGGGATGTCATCCATGCAGGTGGACAATCCTCAGAGAGGATTCAGTGTGCTAGCTGACGGACCCCTTGATATGCGCATGGATCCTCAGGCAAGTCTTAAAGCAGAAGACATATTAAATTTCTGGCCAGAAGCTGAAGTGGGGCGTATCTTAAGAGATTACGGGGAAGAAAGTAATTGGCATACCCTGCAGAAGAAGATTGTCCAAGCTCGATTACATGGTGGATTGCATTCCACTAGTGACTTGCTAGATCTTATTCGGCGTGTAACTCCTGCAATGAAAGGTGGTAGGCAAGGTTGGATAAAGACAGCAACCCGGGTGTTTCAAGCTCTGAGAATAGCTGTTAATGATGAACTGAAGACTCTTGAGGATTCCCTCTATTCTTGTTTTGATTGCCTTGCACCGGGGGGCAGGCTTGCTGTCATATCTTTCCATAGTCTGGAGGACAGAATTGTGAAGCAGACATTTCTTGATATAGTTAAAGGGAGCGAAGATGAGGGTGAAGGGGAGAACCACAATAGTGATTTGAGGAAGATGATTAATGAGATTAAAGAGAAAGAAGCATGGATAAAACATGTAATACATGGCTCCAATGGAACAATTCTCACAAAAAGACCAATCACTCCATCAGGAGAAGAAGAAAAATTGAACCGCCGAAGTAGAAGTGCAAAGCTCAGGGTGATCCAGAAGCTTTGA 1272 0.4536 MAIVSKISSSLTSLSSPTPKLINRLRHLTALSYSSSTVNAISSSRSATVTKKQKQKAALAKEKRRTRSDKEFDKDAIIERYQSHVPVMLAEVLDVFANCSLSSFADCTLGAAGHSSAVISGHGELKYFVGMDVDPVAHDMAQARINSVLQNPLDGGVKVFTLLRNFRHIKSALRETGEEPLVDGGLDGILMDLGMSSMQVDNPQRGFSVLADGPLDMRMDPQASLKAEDILNFWPEAEVGRILRDYGEESNWHTLQKKIVQARLHGGLHSTSDLLDLIRRVTPAMKGGRQGWIKTATRVFQALRIAVNDELKTLEDSLYSCFDCLAPGGRLAVISFHSLEDRIVKQTFLDIVKGSEDEGEGENHNSDLRKMINEIKEKEAWIKHVIHGSNGTILTKRPITPSGEEEKLNRRSRSAKLRVIQKL* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1613 423 Gene3D Vaccinia Virus protein VP39 84 420 IPR029063 -
Dod08g1613 423 Hamap Ribosomal RNA small subunit methyltransferase H [rsmH]. 84 423 IPR002903 GO:0008168
Dod08g1613 423 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 84 423 IPR029063 -
Dod08g1613 423 Gene3D Putative methyltransferase TM0872, insert domain 203 310 IPR023397 GO:0008168
Dod08g1613 423 SUPERFAMILY Putative methyltransferase TM0872, insert domain 205 308 IPR023397 GO:0008168
Dod08g1613 423 Pfam MraW methylase family 83 422 IPR002903 GO:0008168
Dod08g1613 423 TIGRFAM TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 82 422 IPR002903 GO:0008168
Dod08g1613 423 PANTHER S-ADENOSYL-METHYLTRANSFERASE MRAW 64 423 IPR002903 GO:0008168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1613 K03438 - gmx:100787277 575.474