Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1610 ATGGCTGATGAGAAGGTAGTTGGGGAAAGTGAGAAGAAAGAGGCAACAAGTGCTGATGCTGTTGGTGGAGAAGGGAAGAAGAAGAAGAGAAAGGGGATAATTTCAAGAATTTGGAACGGGATATTTAGAAGGCGCGGTGATGATTTCGAGAAGAGGCTGCAATATATAACGAAGGAGGAAGCTGCGGTTATGGCTAGGTTGAGCAGGAGGTCCCGCTCGTGGCGCCGAACCTCTCGGCAGCTTATTATATTTTCTGTTATATTTGAGGTTATCGCTGTAGGTTATGCTATTATGACAACAAGATCGTCGGATATGAATTGGAAAATGAGGGCAATCCGGGTTTTGCCGATGTTTCTTTTGCCTGCCTTGTCGTCTGCTGCTTATTCAACGTTTGTCAGCTTCACAAAGATGTGTGATCGCAAGGACCAGAAAATTCTTGAAAAGCTTAGGGCTGAAAGGCAGGAAAAAATTGATGAGCTCAAAGAAAAGACAAATTATTACATTACTCAACAACTCATTCAGAGATATGACACAGATCCAGCAGCAAAAGCAGCTGCTGCAAGTGTTTTGGCATCCAAGATGGGTGCAGATTTGGGCTTGAAAGTGTATGTGGGAGATGAATCCAAGTCTGGTGCTCCAACAGGGAAGAGCAATGATGCCGAGCCTGTAAAATCTACTGGACTTCGAAATCGCAAACAAGCGCACTCTAGATCCACCAGTCCAGGGACAACTACTCCAAATTATTCTGAGCAACAACAATTAGTTGGCTCTGCCGGAATTGATCAAACTCATACTTCTGCTCCTACTCAGCCTGTAGTTGTTGAACATCACCAACCACAAAGTTCAACACCGCAGGATGGAGGATGGATTGCTCGTATTGCAGCATTGCTTGTAGGTGAGGATCCAACACAATCATACGCGCTCATATGCGGTAACTGCCGTATGCATAATGGTCTTGCTCGGAAGGAGGATTTCCCTTTCATTACTTACTACTGCCCACACTGTCACGCCCTGAACAAACCAAAGCAATCGGGTGAGTGTGTCTCTGGTATCAATTCCCCAAACACGGGTTCTCCGAAAACAGATGATGGTGCTGCTGTTGAAAACGTTAGTGCTTCTGCAGCTGAAAGCATAATCAAAAGCAATAATCGTGTACAAACAAGCCCTGAGATTGAGGAAGTGTCTGAAATAGCTAGTTCGGGGGATAAGGATAGTTAA 1218 0.4491 MADEKVVGESEKKEATSADAVGGEGKKKKRKGIISRIWNGIFRRRGDDFEKRLQYITKEEAAVMARLSRRSRSWRRTSRQLIIFSVIFEVIAVGYAIMTTRSSDMNWKMRAIRVLPMFLLPALSSAAYSTFVSFTKMCDRKDQKILEKLRAERQEKIDELKEKTNYYITQQLIQRYDTDPAAKAAAASVLASKMGADLGLKVYVGDESKSGAPTGKSNDAEPVKSTGLRNRKQAHSRSTSPGTTTPNYSEQQQLVGSAGIDQTHTSAPTQPVVVEHHQPQSSTPQDGGWIARIAALLVGEDPTQSYALICGNCRMHNGLARKEDFPFITYYCPHCHALNKPKQSGECVSGINSPNTGSPKTDDGAAVENVSASAAESIIKSNNRVQTSPEIEEVSEIASSGDKDS* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1610 405 MobiDBLite consensus disorder prediction 207 249 - -
Dod08g1610 405 PANTHER ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK 22 401 IPR040115 GO:0071786
Dod08g1610 405 Coils Coil 143 166 - -
Dod08g1610 405 MobiDBLite consensus disorder prediction 1 27 - -
Dod08g1610 405 PANTHER INTEGRAL MEMBRANE METAL-BINDING FAMILY PROTEIN (DUF2296) 22 401 - -
Dod08g1610 405 MobiDBLite consensus disorder prediction 232 249 - -
Dod08g1610 405 Pfam Predicted integral membrane zinc-ribbon metal-binding protein 289 339 IPR019273 -
Dod08g1610 405 MobiDBLite consensus disorder prediction 380 394 - -
Dod08g1610 405 MobiDBLite consensus disorder prediction 380 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1610 Dod-Chr8 37629473 37634690 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1610 K23292 - gmx:100804882 584.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1610 08 37629473 37634690 Dod09g0997 09 30308174 30312422 PCT