Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1602 ATGACGAGTTTCAAAAATTCTTCGCTTCTCTACTTAGCTCTTTTGCTTATACTCTCTTCTGCCACGCATGCCTTTGACATCTCACAAATGCTTACGCAATACCCAGAGTTCTCCTCTTTCAACAAATTTCTTACAGACGCCAACCTTGCAGGGCAAATCAACAGCCGCAAGACCATCACCGTGCTCGTGTTTGACAACGGCGCCGCCGCCTCAATCTCCGGCAAGTCCCCGGATGCCATGAAGGCCATCGTTGCCACCCACGTGATACTTGATTACTACGATGAGAAGAAGCTCATGCAAGCACAAGGAAGCAACTTGTTATTAACTACCCTCTACCAAGCAACTGGCCTTGCGGTGAACCAGCAAGGGTTCATCAAGGTAGCACTTGTTGGCGAAGGTGAGATTGCATTTGGTTCTGCTGTGAACGGTGCACCGATGGATGCGAAGCTCGTTAAGACCGTTACCACCCAACCATACGACGTCGCCATCCTTCAAATCTCACAACCCATCTTATTCCCTGGCCAGGCTTCCGGGCCTGGGTCTGCACAGCCCGGTGGACGGGGTGCGAACGCACCGGGCTCGGCCCAAGGAGGAGCAAACTCACAAGGTGCCAATGCACCGGGCTCAGCCCAAGGAGGGACTAATCCGGGGGCCTCACAAGGGGGTAAGGCACCGGCACCAGCCCAAGGAGGAACTACTCCAGGGGCCTCACAGGGTGTAAACGCTCCAGGTCCAGCCCAAGGAGGAACAAGCCCAGGGGCCTCAAAGGGTGCAAACGCACCTGCCCCAGGCCAAGGATCAACCAACGCAGGTAGCTCACAGGGAGCAAACGCGCCAAGCTCAGCCAACGCAGGGACATCACAGGGTGCAAACGCACCAAGCACATCGCCCTCACAAGGAGGAAGTGCACCAGGCCCAGCCCAAGGAGGTACCTCAAATGGTGCAAATGCACCAGGCCCGGCAGGTGGCTCCTCTTCCTCATCTCCAGGACAAGGTGCAAATGCCCCAGGTGCCAATGCACCAACTTCGAATGGTCCTGCGGCTGCTTCACCTTCTGGTGGTGATGCCGCCTCACCTTCTAGTGATAGCGCTGCCGCCGACGCCCCAACCGCAGCCGGAGGCCCAGCACCAAAAGCTGCAGCCCCCGGCCCAAGTATAGCTAAGGCTCCAGCTGCAGATGGTCCTGCGGCTGGGCCTACAGATGGTGCTGCGGATACACCAGCTCCTGCTAGCAGCTCTTCACGCACCAAGATTGGTCTGTTTGGGGCAATGGTGGGCTTTGCTTCCCTCTTCATAGTTTTGTAA 1305 0.5678 MTSFKNSSLLYLALLLILSSATHAFDISQMLTQYPEFSSFNKFLTDANLAGQINSRKTITVLVFDNGAAASISGKSPDAMKAIVATHVILDYYDEKKLMQAQGSNLLLTTLYQATGLAVNQQGFIKVALVGEGEIAFGSAVNGAPMDAKLVKTVTTQPYDVAILQISQPILFPGQASGPGSAQPGGRGANAPGSAQGGANSQGANAPGSAQGGTNPGASQGGKAPAPAQGGTTPGASQGVNAPGPAQGGTSPGASKGANAPAPGQGSTNAGSSQGANAPSSANAGTSQGANAPSTSPSQGGSAPGPAQGGTSNGANAPGPAGGSSSSSPGQGANAPGANAPTSNGPAAASPSGGDAASPSSDSAAADAPTAAGGPAPKAAAPGPSIAKAPAADGPAAGPTDGAADTPAPASSSSRTKIGLFGAMVGFASLFIVL* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1602 434 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 5 432 IPR033254 -
Dod08g1602 434 MobiDBLite consensus disorder prediction 174 415 - -
Dod08g1602 434 MobiDBLite consensus disorder prediction 194 218 - -
Dod08g1602 434 MobiDBLite consensus disorder prediction 261 365 - -
Dod08g1602 434 SUPERFAMILY FAS1 domain 31 172 IPR036378 -
Dod08g1602 434 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 5 432 - -
Dod08g1602 434 ProSiteProfiles FAS1/BIgH3 domain profile. 24 170 IPR000782 -
Dod08g1602 434 MobiDBLite consensus disorder prediction 231 245 - -
Dod08g1602 434 Gene3D FAS1 domain 24 170 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1602 Dod-Chr8 37237316 37238620 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1602 - - adu:107495242 300.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1602 08 37237316 37238620 Dod08g1602 08 37237316 37238620 ECH