Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1569 ATGAGGATCGAGCCCGAAAGTGATGCAGTCTCCGCTTCCAGGAAGCACCTCGTCTTCGCTTACTACGTCACTGGTCATGGTTTCGGCCATGCCACTCGAGTCACCGAGGTGGTGCGGCATTTGATCAATGCCGGGCATGATGTGCATGTGGTTACTGGTGCTCCTGATTTTGTTTTCACCTCTGAAGTACAGTCTCCTCGCTTATTCATTCGTAAGGTGCTTTTGGACTGTGGAGCAGTTCAGGCAGATGCTTTGACAGTTGATCGTCTTGCCTCTTTGGAGAAGTATTCTGAGACAGCGGTGAACCCTCGCCCCAGAATCTTAGCTCAAGAAACAGAATGGCTGAACTCTATCAAAGCTGACTTAGTGGTCTCTGATGTTGTCCCGGTTGCATGTCGTGCAGCAGCAGATGCTGGCATTCGGTCTGTTTGTGTAACCAATTTTAGTTGGGACTTCATCTATGCAGAATATGTCATGGCCGCTGGAATTCATCATCGCTCAATAGTTTGGCAGATAGCTGAGGACTATTCCCACTGCGAGTTCCTTATCAGACTCCCAGGATATTCCCCCATGCCTGCTTTTCGTGATGTTATTGATGTACCTCTGGTTGTGAGGAGGTTGCACAAATCTGCAAAAGAGGTGAGGAAGGATCTTGGGGTAACTGATAATGTGAAGCTAGTTATTCTCAACTTTGGTGGACAGCCATCAGGATGGAAGCTGAAGGAGGATTTCTTACCTTCTGGCTGGTTGTGCCTGGTTTGTGGTGCTTCTGAGAATGCCAACCTTCCTCCAAACTTTAAAAAACTTCCTAAAGATGCATATACTCCTGACATTATTGCAGCGTCTGACTGTATGCTTGGAAAAATTGGATATGGCACTGTTAGTGAAGCCTTGGCATACAAGTGTCCTTTTGTCTTTGTACGTAGAGACTATTTCAATGAAGAACCTTTTTTGAGAAATATGCTTGAGTATTACCAATGTGGTGTTGAGATGATTAGGAGGGATTTACTCACTGGTCATTGGAGACCATATCTTGAACGTGCAATAAGTTTGAAACCCTGCTATGAAGGAGGCATTAATGGTGGCGAGGTGGCAGCCCACATCCTTCAGGAGACTGCTTTTGGAAAAAATTATGCTTCAAATAAGCTTAGCGGGGCAAGAAGATTACGTGATGCTATTGTTCTTGGGTATCAACTACAAAGGGCCACTGCCCGAGATATTCCAATCCCAGAATGGTATGCAACTGCTGAAAACCAACTTGGCCAGCCATCACCAGGTCAGCCAAAGGATGGTGGAAGCGTTATGATCAGCTCTGGCATAGAAGACTTTGAGATTCTTCATGGAGATCTTCAAGGTCTTCCAGATACTATTGCTTTCTTAAAGAGCTTAGCTGAATTAGACGAGAAGGCCAAAAGGCGGGAGCGTAAGGCTGCAGCCAGTCTGTTCAAATGGGAGGAAGATATTTTTGTGGCAAGAGCTCCTGGAAGGTTGGATGTGATGGGTGGTATTGCTGACTATTCTGGAAGCCTTGTTCTGCAGATGCCAATTAGAGAAGCCTGCCATGTTGCCTTGCAAAGGGTCCGTCCAAGCAAACATAAACTGTGGAAACATGCTGAGGCTAGACAGAATGACAAAGGAGGAAATCCAACTGCTGTTTTGCAAATTGTATCATATGGCTCGGAATTGGGTAATCGTGGTCCAACATTTGATATGGATTTGTCTGATTTTATGGACGATCGTGGCAAGCCAATATCATATGAGAAAGCAAATAAATTCTTTGCTCAAGATCCATCCCAAAAATGGGCAGCATATGTTGCTGGGGCAATTTTGGTCTTGATGACAGAGTTGGGTGTGCGATTTGAAGATAGTATCAGTATGCTGGTTTCATCTGCAGTCCCTGAAGGGAAAGGTGTATCGTCTTCTGCGTCTGTGGAGGTTGCTAGCATGTCTGCCATTGCAGCTGCTCATGGATTAAATATCAGCCCAAGAGACCTGGCCTTACTCTGCCAGAAGGTGGAAAATCACATTGTAGGAGCTCCATGTGGTGTCATGGACCAGATGGCCTCAGCATGTGGTGAAGCCGACAAACTTCTTGCTATGATTTGCCAGCCTGCAGAGATTGTTGGCCTTGTAGAGATTCCTAACCATATCCGGGTCTGGGGAATTGATTCTGGAATAAGACACAGTGTTGGAGGTGCAGACTATGGATCTGTCAGAATTGGCACCTTCATGGGTCTGAAGATGATCAAGTCCAGGGCTTCTAATGAATTGTCTGAGATGCGTGCTATTGGATTGAACAATGAGGAAGTGGAACAAGATGATATAGAACTACTTAAACAAGAAGCCTCCTTAGAATACTTATGTAATTTGTCACCTCACAGATTTGAAGCTCTTTATACTAAGAAGATTCCCGAATCTGTTAAGGGTGAGGCATTTTTGAAGGATTACAAAAATCACAATGATCCTGTCACTATTATTGATCAGAAGTGCACTTATGGAGTGAGAGCTCCCACGATACATCCCATATATGAAAATTTCCGAGTCAAGACCTTCAAAGCACTTCTAACATCGGCTACTTCTGCTGATCAACTTACAGCCTTAGGAGAATTGCTATATCAGTGTCACTATAGCTACAGTGCTTGTGGACTTGGCTCTGACGGAACAGATAGACTTGTACACTTGGTACAAGAGCTGCAACATAGTGCAGCTTCTAAAGCTGAAGGTGGGACATTATACGGAGCCAAGATCACTGGTGGGGGTTCTGGTGGAACGGTTTGTGTAATTGGTAGAAATTGTCTCAAGAGCAGTGAACAAATTCTGGAGATTCAGAAGAGGTACAAAAAAGGAACTGGTTATATGCCCTTTATTTTTGAGGGTTCATCACCTGGTGCCGGAAAGTTCGGGTATCTGAAAATACGCCGTCGGTCTGCTCCCAGAACCAGCAATGGCAGTGAGGACGGGAGTCCAGTTTTGGGGGAGCATTGA 2985 0.4516 MRIEPESDAVSASRKHLVFAYYVTGHGFGHATRVTEVVRHLINAGHDVHVVTGAPDFVFTSEVQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVNPRPRILAQETEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGIHHRSIVWQIAEDYSHCEFLIRLPGYSPMPAFRDVIDVPLVVRRLHKSAKEVRKDLGVTDNVKLVILNFGGQPSGWKLKEDFLPSGWLCLVCGASENANLPPNFKKLPKDAYTPDIIAASDCMLGKIGYGTVSEALAYKCPFVFVRRDYFNEEPFLRNMLEYYQCGVEMIRRDLLTGHWRPYLERAISLKPCYEGGINGGEVAAHILQETAFGKNYASNKLSGARRLRDAIVLGYQLQRATARDIPIPEWYATAENQLGQPSPGQPKDGGSVMISSGIEDFEILHGDLQGLPDTIAFLKSLAELDEKAKRRERKAAASLFKWEEDIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQRVRPSKHKLWKHAEARQNDKGGNPTAVLQIVSYGSELGNRGPTFDMDLSDFMDDRGKPISYEKANKFFAQDPSQKWAAYVAGAILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNISPRDLALLCQKVENHIVGAPCGVMDQMASACGEADKLLAMICQPAEIVGLVEIPNHIRVWGIDSGIRHSVGGADYGSVRIGTFMGLKMIKSRASNELSEMRAIGLNNEEVEQDDIELLKQEASLEYLCNLSPHRFEALYTKKIPESVKGEAFLKDYKNHNDPVTIIDQKCTYGVRAPTIHPIYENFRVKTFKALLTSATSADQLTALGELLYQCHYSYSACGLGSDGTDRLVHLVQELQHSAASKAEGGTLYGAKITGGGSGGTVCVIGRNCLKSSEQILEIQKRYKKGTGYMPFIFEGSSPGAGKFGYLKIRRRSAPRTSNGSEDGSPVLGEH* 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1569 994 Pfam GHMP kinases N terminal domain 627 692 IPR006204 GO:0005524
Dod08g1569 994 PANTHER L-ARABINOKINASE 17 973 - -
Dod08g1569 994 Pfam Galactokinase galactose-binding signature 484 525 IPR019539 -
Dod08g1569 994 Gene3D - 468 719 IPR014721 -
Dod08g1569 994 SUPERFAMILY Ribosomal protein S5 domain 2-like 486 706 IPR020568 -
Dod08g1569 994 PRINTS Mevalonate kinase family signature 913 930 - -
Dod08g1569 994 PRINTS Mevalonate kinase family signature 493 517 - -
Dod08g1569 994 PRINTS Mevalonate kinase family signature 630 652 - -
Dod08g1569 994 PRINTS Mevalonate kinase family signature 673 692 - -
Dod08g1569 994 PANTHER MEVALONATE KINASE/GALACTOKINASE 17 973 - -
Dod08g1569 994 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 23 333 - -
Dod08g1569 994 SUPERFAMILY GHMP Kinase, C-terminal domain 718 966 IPR036554 -
Dod08g1569 994 Pfam GHMP kinases C terminal 862 947 IPR013750 -
Dod08g1569 994 PIRSF Gal_kin_glcsltr 1 978 IPR012369 -
Dod08g1569 994 Pfam Glycosyl transferase family 1 21 147 - -
Dod08g1569 994 Gene3D - 817 951 IPR036554 -
Dod08g1569 994 Gene3D Glycogen Phosphorylase B; 20 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1569 Dod-Chr8 35940141 35962103 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1569 K12446 - gmx:100306164 1699.1