Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1551 ATGGATTGTTCTTGTTTCTCACTGCGTGTTGTTACCTTTTTTGGCATAGCGCAGTTTTACGCTTCGAAGAAAAGGAAAGCGGCGTCACCTGTTTCGAAGCCTGGGAGATCCGAGAAAGGTTCAAGGTATGGCGTTGATGGGTCTCCAAGTGCCAAAGGTACTTTGGACAGTTACTTAGTTACTTCACAGGATGACTGCATTGCCACAAAGCCGTCGAATGCCGCCACTGCCGGTGATGCTTTGGCTAGGAACAATTCGGTTAAGAGAAATTTGGGATTAGATATTAGTAGTTCTCTTGAAAATGAAGCTAGTAAGCTTCCTGTTTCATTGGCTCAAGGGCATCAGCAGGCGCAAGCAATGCGGCCGGGACTAATGAATGAATTACCAGAGGCGAGTGGCGCAGCAGTCGAGGACCCTGCTAGGGATAAAAGTTGGAGTGGTTATGGACAGGGCGCCCAAAATGCGGAGATCAAACGGTTTACAACAGACTTTTTGTCTTTGTATTGCAGTCAAGTGAATCACAGCATTGTTTTGCCGTCAGAGACGAAAGTAGATGGCCATAAGAGAGACAATTCCCCAGCATTAGTAGACAAAAATATTAGTTTGCCCGAAAAGTGTGATGACACCAGCAGTGAGCCATGTTTTGGTAGTGAAAACATCCCCAGTGACAAGATTCCTGAAGACATCTATTCTGGTGTTGTTGGTAGTGACACAAGCCTTAGAAAATGTAGTTATGCACCAAGAACAAGTATGGATCTGGCTGAATGTTATACGCCAGGATCCTTAATTGTCAAAGCGTGTGTTAAGGAGACTCCAAAGTCCACACGTGGAAGCTCAATGTTTTCACCTGGAGAGGCTTTTTGGGATGAAGCGATTCAAGTTGTTGATGGTTTGTGCATTCCTGTCACTAATGATTCTTCTAAGGTTATAGAAGAGAGCAATGTGGTAGGAGACCAACTTGAAATGAAGAACTCGTGTAATTTACAAAATCATGATGGCAAGTCGAGGAAAATATTGGATCAAAGCAAAAACAGAATTTGGAATAGGGAAGTGAGTACTCCATCAGGATTGGTTGGGATGTGCACAAAAGATTCTATGAAAGAAGTCTCTAGCCTTCCTGTCAAGCATTTTGACTTTTCGTTTGAGGACAATAATTTGGGTGAAAGTACCCTGCAAAATTGTTGTGTTGATGATGCGACTAATGTTGGTTATGGGGATGACAGACAGCAAGAATGTAGTTCTGTAGCAGGCCATACATATCAAAAGATGGACGAAGGGCAAGAGAAGCCTTCGGTAGATGCATTATGCAAAAGAGTGAACTTTTCAAACCAGGATAATTTTAGTATGACATCTAATTCACCCCTTATTGGGGTCAGGACAGCAATCAATACACATGCATCTGATGAAGCTGGTACTCCTTCAAGTAGTGTGTCACTTAGAAATCATTTAAACCTAAACAGCTGGCTTCCACCTGAAATATGCAGTATATATAGAAAGAAAGGAATCTCAAAGCTTTATGATTGGCAGGTTGACTGCCTTAGGGTGGATGGGGTCCTACAGAGAAGAAATCTTGTATATTGTGCTTCTACCAGTGCTGGTAAGAGTTTTGTTGCCGAGATTTTAATGCTGCGGAGGGTGATATCTACTGGAAAAATGGCACTACTTGTTCTTCCATATGTATCAATTTGTGCTGAAAAGGCAGAACACCTTGAACGTCTTCTTGAGCCACTCGGTAAACAGGTTCGTAGTTATTATGGAAATCAAGGTGGTGGAACACTTCTTAAAGACACTTCTGTAGCTGTTTGCACGATAGAGAAGGCAAACTCATTAATTAATAGGCTATTGGAAGAGGGCCGCCTCTCAGAAATGGGGATTATTGTGATAGACGAACTGCATATGGTTGGTGATGCAAGTCGGGGTTATCTTCTAGAACTCATGTTGACAAAGCTTCGTTATGCAGCAGGGGAAGGTATTTCAAAATCAAGTGATGGAGAAAGTTCAGGTGGAAGCAGCGATAGGTCTGATCCTGCTCAAGGTCTGCAAATCGTTGGAATGAGTGCGACAATGCCAAACGTAGCAGCAGTTGCTGACTGGCTTCAAGCTGCACTATACCAGACAGAGTTCCGGCCAGTTCCTTTAGAAGAATATATAAAAGTTGGTAATTCCATATATAACAAGAGTATGGAACTTTCCAGAACAATCTCAAAAGCAGCTGACCTTGGTGGTAAAGATCCAGATCATGTTGTTGAGCTTTGTAATGAGGTTGTCCAAGAGGGACAATCAGTGTTAATATTTTGCTCTAGCCGAAAGGGTTGTGAATCAACTGCAAGGCATGTTGCAAAGTTCCTTAAAAGCTTTACTGTTCATGTTCATGAGAATGATTGTGAGTTTGCTGATATAACTTTTGCTATTGACTCCTTGAGAAAGTGTCCTGCTGGGTTGGACCCCATATTAGAGGAAACCCTTCCTTCTGGAGTTGCATTTCACCATGCTGGCCTTACGGTTGAGGAAAGAGAGATTATTGAAACATGTTATCGAAAAGGCCTCTTACGTGTCTTAACTGCCACGTCGACCTTAGCGGCTGGGGTTAATCTTCCAGCTAGGAGGGTAATTTTCCGCCAACCTAGAATTGGTCGTGATTTTCTAGATGGGACGAGGTACAAACAGATGGCTGGTCGTGCTGGTCGTACAGGAATTGATACAAAAGGAGAAAGTGTACTTATCTGCAAACCGGAAGAGATGAAAAAGGTTATGGGGCTTCTTAATGAAAGCTGTCCGCCATTAAATTCCTGTTTATCTGAAGATAAGAATGGAATGACTCATGCAATCTTAGAAGTTGTGGCTGGAGGAATGGTTCAAACTGCTAGTGATATTCATCGGTATGTTAGATGCACACTTTTAAACTCTACAAAACCATTTCAAGATGTGGTGAAATCTGCGCAAGAATCCCTTCGCTGGTTATGTCAAAGAAAATTTCTTGAATGGAATGAAGACACTAAACTCTATAGTACCACACCTCTTGGACGTGCAGCTTTTGGCAGCTCTCTCTGTCCAGAAGAATCACTTATTGTGCTAGCTGATCTTTCAAGAGCTAGGGAAGGATTTGTCCTCGCATCTGACTTGCATTTAGTGTACTTGGTCACTCCAATCAATGTTGACATTGAGCCAGAGTGGGAACTATACTATGAGCGTTTTGTGAAATTGTCGCCGCTTGACCAGTCAGTCGGGAATCGAGTAGGTGTGACAGAACCAGTCTTGATGCGTATGGCACATGGTGCACCAATACGTCCATCAAACAAGTCAAGAGATAACCCAAGATGGATCCACAATAAACGAGGAAATCAACCTGGGATCTCTGATGGAATCATTAACTCGGATGATCAAACACTTCGTGTTTGTAGAAGATTCTATGTTGCTCTTATTTTATCACTGCTCATTCAGGAAACTCCTGTGGGCGAGGTTTGTGAGGCGTACAAAGTTGCCAGAGGAATGGTTCAAGCCTTGCAAGAGAATGCTGGAAGGTTTGCATCTATGGTTTCTGTATTTTGTGAGAGGCTTGGGTGGCATGATCTTGAAGGCTTAGTTTCCAAGTTTCAGAATCGTGTATCATTTGGAGTCAGAGCAGAGGTTGTTGAGCTTACCACCATTCCCTATGTTAAAGGCTCTCGAGCCAGAGCACTCTATAAAGCAGGTTTACGAACACCTCTTGCAATTGCTGAAGCATCGATACCTGAATTAGTAAAAGCACTTTTTGAATCTTCATCTTGGGCCACAGAAGGTTCTGCAAAAAGGAGCTTACAATTTGGTGTAGCCAAGAAGATTAAGAATGGTGCTCGCAAGATTGTTCTAGATAAAGCTGAAGAGGCAAGGATTGCTGCTTTCTCAGCCTTTAAGTCACTTGGATACAATGTTCCCCAGTTTGCTCCAGCCATATTACACCCTACTGCATCTGATTCTATCAAGCAAGAAGCTGGAAGTAACTCTGGAAGTGACACAGCTGACACTAGTCATAGCTTTGTTGATACTGATCACATTGAAAATAATTCTAATAAAGTTGCTTTAGAAAAAGATAGAGTAGACTTGATAAAATCATCTGAAAATGGTGCTCTGGTTCATATAAAAGTAAAACCAATCAGCAAGATGCCATGTAGCTTGTCTACTGAAATGTCTGAACATCCAGTCATTGGATCTATGAGGAATGAGCTCAATGCTACTTTAGACCCTACTAAAAATGTAGATATCACCACCCTCTCTGTTCAGGTACAGAAACCAAATGGTAACACCAGTATACATGATGATGTGTGCCATGCTCGTGGTTCAGAGGATCAACATCATAGTGGAATTTTGCCTAGTGGGAATGTGGATAGTTCTGCCCAGAGGGGTCCCATTAATGCAGTTAGTAGTCCTGGTGGGCTTGATTCATTTCTGGATCTTTGGGACACTGTGCCGGAGTTCTACTTCGATATCCACTATGTCAAACGATTGGAACTGCACTCTGTTGCTCCTTTTGAAATACATGGCATAGCCATCTGTTGGGAAAACTCTCCTGTGTACTATGTTAATCTACCGAGGGATATTCTGTTGTCTAACAATAAAAAAGATGACTGTTTATCCTTGAGTGCATCTAGTCATAAGCAGAAGGTTTCATCTTCTAATTCTAAGCATGATTTGGAGATTGCCAGGCATAGGTGGATCAGGATTAGTGAAATAATAGGGAAAAGGAATGTCAGAAAGTTCACCTGGAATTTGAAGATTCAGATTCAGGCACTGAAAAAGCCAGCAGTTTCAGTTCAGAGATTTGGTTGCTTGGACACTCTTGAAAATAATACGGGCTTCCAAATTGTAGACAGTTCATACATATTACTACCACCTGTCCTTGTTAAGGATGCAATCGACATGTCCATTGTGGCTTGGGTTCTTTGGCCTGATGAAGAGAGGAGCTCAAATCCAAACCTGGAGAAGGAGGTAAAGAAGAGGTTGTCATCTGAGGATGCTGCAGCAGCTAACCAGGGTGGCAGGTGGAGGAATCAGATGCGCAGAGCTGCACATAATGGTTGCTGCCGTCGGGTTGCTCAAGCACGAGCATTATGTTCTGTTCTTTGGAAATTACTTGTTTCTGAGGAACTTGTTGAAGTGCTTTTGGGAATAGAAGTCCCATTGGTGAATGTTCTTGCTGACATGGAGCTTTGGGGAATTGGTGTTGACTTGGAGAGATGCATCCAGGCTCGTAAATTGTTGGTGAAAAGGCTGAAGTATCTTGAGAAGGAAGCATATAAACTTGCTGGGATTACATTTTCATTGAATATGCCAGCAGAAATTGCAAAGGTGCTGTATGAACACTTGAAGCTGCGTATACCTGATGGGCGAAATAAGGGAAAACAACATCCAAGTACTGACAAGCACTGTTTGGATGCACTAAGGCATGAACATCCCGTTGTTCCAGTCATTAAAGAGCATCGAACAATGACAAAGCTCTTGAATTCTACACTTGGATCAATTTGTTCTCTAGCTAGGCCGTCAGTAAGCACACAAAAGTACACATTACATGGGCAATGGCTTCAGACTTCTACTGCAACTGGTCGACTTTCAATGGAGGAACCTAATCTTCAGTGCGTTGAACATACGGTGGACTTCAAAATGGATGACGACAAAAATGGAGGTGACCCTGATGAAAGTTATTGTAGTATTAATGCTCGTGATTTCTTTGTTCCTACTCAGGACAACTGGTTACTGTTAACAGCAGACTATTCTCAAATCGAGTTGAGGCTGATGGCACACTTCTCTAAAGATTCTTCACTTATTGAGCTACTCAGTAAGCCTAATGGTGATGTCTTTACAATGATAGCAGCAAGATGGACTGGGTGTGCTGAGGCTTCTGTGGGTTCCCACGAGAGAGATCAGACCAAAAGGATGGTGTATGGCATTCTTTATGGTATGGGTGCCAATAGCCTCGCTGAACAACTGGATTGCACTTCTGATGAAGCTGCAGAAAAGATTAGTAATTTCAAAAGCTCTTTTCCCGGTGTTGCTTCCTGGCTTCATGAAGCTGTTGCTTCTTGTCGTAGCAAAGGGTATGTCGAGACACTTAAGGGAAGAAAAAGATTTTTGTCAAAAATAAAATTTGGTAGCAGTACAGAAAAATCGAAAGCTCAAAGACAGGCGGTGAATTCCATTTGTCAGGGATCTGCTGCAGACATAATTAAGATTGCAATGATAAGAATTTACTCTGTAATTGCCACTGGGGTTGATAGCCTGGATTCTAGTTCTTCTATGGTGACCCAGTTCCACATGCTTAGAGATCGCTGCCGAATTCTGTTACAGGTACATGATGAGTTAGTGCTGGAAGTTGATCCTTCCATGATAAAAGAAGCTGCCGTGCTGTTACAGACGAGCATGGAGAATGCAGTCTCACTTCTTGTTCCCCTGCGTGTCAAACTTAAGGTTGGAAGAACATGGGGATCTTTGGAGCCATTTGCAGCTGATAAATTCAAAGATGATGCTCACATCACTGAATCCTGA 6519 0.4254 MDCSCFSLRVVTFFGIAQFYASKKRKAASPVSKPGRSEKGSRYGVDGSPSAKGTLDSYLVTSQDDCIATKPSNAATAGDALARNNSVKRNLGLDISSSLENEASKLPVSLAQGHQQAQAMRPGLMNELPEASGAAVEDPARDKSWSGYGQGAQNAEIKRFTTDFLSLYCSQVNHSIVLPSETKVDGHKRDNSPALVDKNISLPEKCDDTSSEPCFGSENIPSDKIPEDIYSGVVGSDTSLRKCSYAPRTSMDLAECYTPGSLIVKACVKETPKSTRGSSMFSPGEAFWDEAIQVVDGLCIPVTNDSSKVIEESNVVGDQLEMKNSCNLQNHDGKSRKILDQSKNRIWNREVSTPSGLVGMCTKDSMKEVSSLPVKHFDFSFEDNNLGESTLQNCCVDDATNVGYGDDRQQECSSVAGHTYQKMDEGQEKPSVDALCKRVNFSNQDNFSMTSNSPLIGVRTAINTHASDEAGTPSSSVSLRNHLNLNSWLPPEICSIYRKKGISKLYDWQVDCLRVDGVLQRRNLVYCASTSAGKSFVAEILMLRRVISTGKMALLVLPYVSICAEKAEHLERLLEPLGKQVRSYYGNQGGGTLLKDTSVAVCTIEKANSLINRLLEEGRLSEMGIIVIDELHMVGDASRGYLLELMLTKLRYAAGEGISKSSDGESSGGSSDRSDPAQGLQIVGMSATMPNVAAVADWLQAALYQTEFRPVPLEEYIKVGNSIYNKSMELSRTISKAADLGGKDPDHVVELCNEVVQEGQSVLIFCSSRKGCESTARHVAKFLKSFTVHVHENDCEFADITFAIDSLRKCPAGLDPILEETLPSGVAFHHAGLTVEEREIIETCYRKGLLRVLTATSTLAAGVNLPARRVIFRQPRIGRDFLDGTRYKQMAGRAGRTGIDTKGESVLICKPEEMKKVMGLLNESCPPLNSCLSEDKNGMTHAILEVVAGGMVQTASDIHRYVRCTLLNSTKPFQDVVKSAQESLRWLCQRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLADLSRAREGFVLASDLHLVYLVTPINVDIEPEWELYYERFVKLSPLDQSVGNRVGVTEPVLMRMAHGAPIRPSNKSRDNPRWIHNKRGNQPGISDGIINSDDQTLRVCRRFYVALILSLLIQETPVGEVCEAYKVARGMVQALQENAGRFASMVSVFCERLGWHDLEGLVSKFQNRVSFGVRAEVVELTTIPYVKGSRARALYKAGLRTPLAIAEASIPELVKALFESSSWATEGSAKRSLQFGVAKKIKNGARKIVLDKAEEARIAAFSAFKSLGYNVPQFAPAILHPTASDSIKQEAGSNSGSDTADTSHSFVDTDHIENNSNKVALEKDRVDLIKSSENGALVHIKVKPISKMPCSLSTEMSEHPVIGSMRNELNATLDPTKNVDITTLSVQVQKPNGNTSIHDDVCHARGSEDQHHSGILPSGNVDSSAQRGPINAVSSPGGLDSFLDLWDTVPEFYFDIHYVKRLELHSVAPFEIHGIAICWENSPVYYVNLPRDILLSNNKKDDCLSLSASSHKQKVSSSNSKHDLEIARHRWIRISEIIGKRNVRKFTWNLKIQIQALKKPAVSVQRFGCLDTLENNTGFQIVDSSYILLPPVLVKDAIDMSIVAWVLWPDEERSSNPNLEKEVKKRLSSEDAAAANQGGRWRNQMRRAAHNGCCRRVAQARALCSVLWKLLVSEELVEVLLGIEVPLVNVLADMELWGIGVDLERCIQARKLLVKRLKYLEKEAYKLAGITFSLNMPAEIAKVLYEHLKLRIPDGRNKGKQHPSTDKHCLDALRHEHPVVPVIKEHRTMTKLLNSTLGSICSLARPSVSTQKYTLHGQWLQTSTATGRLSMEEPNLQCVEHTVDFKMDDDKNGGDPDESYCSINARDFFVPTQDNWLLLTADYSQIELRLMAHFSKDSSLIELLSKPNGDVFTMIAARWTGCAEASVGSHERDQTKRMVYGILYGMGANSLAEQLDCTSDEAAEKISNFKSSFPGVASWLHEAVASCRSKGYVETLKGRKRFLSKIKFGSSTEKSKAQRQAVNSICQGSAADIIKIAMIRIYSVIATGVDSLDSSSSMVTQFHMLRDRCRILLQVHDELVLEVDPSMIKEAAVLLQTSMENAVSLLVPLRVKLKVGRTWGSLEPFAADKFKDDAHITES* 2173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1551 2172 Gene3D - 488 710 IPR027417 -
Dod08g1551 2172 MobiDBLite consensus disorder prediction 1320 1344 - -
Dod08g1551 2172 SUPERFAMILY Sec63 N-terminal domain-like 1124 1250 - -
Dod08g1551 2172 Pfam Helicase conserved C-terminal domain 747 898 IPR001650 -
Dod08g1551 2172 CDD SF2_C_Ski2 709 910 - -
Dod08g1551 2172 Gene3D Taq DNA Polymerase; Chain T, domain 4 1731 1843 - -
Dod08g1551 2172 MobiDBLite consensus disorder prediction 660 677 - -
Dod08g1551 2172 MobiDBLite consensus disorder prediction 1440 1462 - -
Dod08g1551 2172 MobiDBLite consensus disorder prediction 27 49 - -
Dod08g1551 2172 MobiDBLite consensus disorder prediction 1446 1462 - -
Dod08g1551 2172 Pfam DNA polymerase family A 1738 2153 IPR001098 GO:0003677|GO:0003887|GO:0006260
Dod08g1551 2172 PANTHER DNA POLYMERASE THETA 505 2159 - -
Dod08g1551 2172 SMART helicmild6 816 898 IPR001650 -
Dod08g1551 2172 MobiDBLite consensus disorder prediction 1647 1662 - -
Dod08g1551 2172 CDD DEXHc_POLQ-like 489 710 - -
Dod08g1551 2172 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 518 912 IPR027417 -
Dod08g1551 2172 CDD DNA_pol_A_theta 1731 2155 - -
Dod08g1551 2172 Gene3D - 717 919 IPR027417 -
Dod08g1551 2172 Gene3D - 1464 1728 IPR036397 GO:0003676
Dod08g1551 2172 Gene3D - 1857 2152 - -
Dod08g1551 2172 MobiDBLite consensus disorder prediction 1647 1670 - -
Dod08g1551 2172 Gene3D - 1085 1229 - -
Dod08g1551 2172 SMART polaultra3 1895 2120 IPR001098 GO:0003677|GO:0003887|GO:0006260
Dod08g1551 2172 SUPERFAMILY DNA/RNA polymerases 1709 2155 IPR043502 -
Dod08g1551 2172 Gene3D - 1919 2063 - -
Dod08g1551 2172 PRINTS DNA-polymerase family A (pol I) signature 1965 1990 IPR002298 GO:0003887|GO:0006261
Dod08g1551 2172 PRINTS DNA-polymerase family A (pol I) signature 2103 2116 IPR002298 GO:0003887|GO:0006261
Dod08g1551 2172 PRINTS DNA-polymerase family A (pol I) signature 2024 2035 IPR002298 GO:0003887|GO:0006261
Dod08g1551 2172 PRINTS DNA-polymerase family A (pol I) signature 2002 2013 IPR002298 GO:0003887|GO:0006261
Dod08g1551 2172 PRINTS DNA-polymerase family A (pol I) signature 1848 1870 IPR002298 GO:0003887|GO:0006261
Dod08g1551 2172 PANTHER DNA POLYMERASE I 505 2159 IPR002298 GO:0003887|GO:0006261
Dod08g1551 2172 Pfam DEAD/DEAH box helicase 518 691 IPR011545 GO:0003676|GO:0005524
Dod08g1551 2172 MobiDBLite consensus disorder prediction 658 677 - -
Dod08g1551 2172 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 747 944 IPR001650 -
Dod08g1551 2172 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 515 707 IPR014001 -
Dod08g1551 2172 Pfam Helix-turn-helix domain 903 994 IPR046931 -
Dod08g1551 2172 SMART ultradead3 501 720 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1551 Dod-Chr8 35404966 35438020 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1551 K02349 - gmx:100813857 3254.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1551 08 35404966 35438020 Dod08g1551 08 35404966 35438020 ECH