Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1548 ATGGCCTACTGCCCGAGAGAGCTAGAAGGGAAGCAAGCTCATGACCCTCTGTTCCTAGAGAAAATGAATAAAAGAAACTCATCATCAACCAGTGATAGATGTGTGTGGGTTCCAGGGCCGGTGATTGTAGGAGCAGGGCCATCAGGTCTCGCGGCAGCAGCATGCCTCAAAGAGAAAGGCGTCCCAAGCGTGATTCTAGAGAGATCCAATTGCATAGCATCCCTGTGGCAGCTGAAGAGCTACGATCGCCTTCGCCTCCACTTACCAAAGCAATTCTGCGAGCTTCCCCTCATGGGGTTCCCTTGTGATTTCCCAACATACCCAACAAAGCAGCAGTTTATAAAGTACTTGGAGAGCTATGCGGAGAGGTTTGACATTAGGCCAAGGTTCAATGAGACAGTGAAAGAGGTAGAGTTCGATGCCACGGTTGGGTTTTGGAGAGTGAAGAGTGTTGGGAAAATGGAGATGAGGACCGAGTTTGTGTGCCGGTGGGCTATAGTGGCGACCGGGGAGAATGCAGATGCGGTGGTGCCGGAGGTTCATGGAATGGGGGAGTTTGGTGGGACTATAAAGCACACGAGTTTGTATAAGAGTGGTGACGAGTTTAGAGGGAAGAGAGTGTTGGTGGTTGGGTGTGGGAATTCAGGGATGGAGGTTTGCTTGGATCTTTGCAACCATAATGCTAGTCCTTCTCTCGTGGTCAGAGACACAGTACACATCCTACCACGAGAGATGCTGGGAAAATCAACTTTCGGGTTGTCCATGTGGTTGCTCAAGTGGCTGCCCATACGGCTTGTCGATGGGTTCCTTCTGATCGTGTCATGGCTCATGCTCGGCGACACTTCTCGATTCGGATTGGACCGGCCACGCTTGGGTCCCCTCCAACTCAAAATCCTGACAGGAAAGACACCAGTGCTTGATGTGGGTACCCTAGCCAAGATTAAAAGTGGACATGTTAAGGTGCGTCCTAGCATCAAGCGACTTAAAAATAAAACGGCTGAATTTGTTGATGGAAGGGCAGAGAATTTCGATGCCATCATATTTGCAACTGGTTACAAAAGTAATGTCCCGTATTGGCTAAAGGAAGGGGATATGTTCTCTAAGGAAGATGGGTTTCCTCGGAGCCCATTCCCAAATGGATGGAAGGGTGAAAATGGGCTCTACGCAGTGGGTTTTACCAAACGTGGACTACTTGGTGCATCCATGGATGCCAAGAACATAGCTCAAGATATTGACCGATGTTGGAAAGCTGAGGCAAAGCATAGTACTTCTTTATCTCTCTCACTAATTATGCCACAATTAAATTCATGA 1311 0.4874 MAYCPRELEGKQAHDPLFLEKMNKRNSSSTSDRCVWVPGPVIVGAGPSGLAAAACLKEKGVPSVILERSNCIASLWQLKSYDRLRLHLPKQFCELPLMGFPCDFPTYPTKQQFIKYLESYAERFDIRPRFNETVKEVEFDATVGFWRVKSVGKMEMRTEFVCRWAIVATGENADAVVPEVHGMGEFGGTIKHTSLYKSGDEFRGKRVLVVGCGNSGMEVCLDLCNHNASPSLVVRDTVHILPREMLGKSTFGLSMWLLKWLPIRLVDGFLLIVSWLMLGDTSRFGLDRPRLGPLQLKILTGKTPVLDVGTLAKIKSGHVKVRPSIKRLKNKTAEFVDGRAENFDAIIFATGYKSNVPYWLKEGDMFSKEDGFPRSPFPNGWKGENGLYAVGFTKRGLLGASMDAKNIAQDIDRCWKAEAKHSTSLSLSLIMPQLNS* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1548 436 Pfam Flavin-binding monooxygenase-like 42 359 IPR020946 GO:0004499|GO:0050660|GO:0050661
Dod08g1548 436 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA6 27 423 - -
Dod08g1548 436 SUPERFAMILY FAD/NAD(P)-binding domain 204 413 IPR036188 -
Dod08g1548 436 PRINTS Pyridine nucleotide disulphide reductase class-II signature 39 61 - -
Dod08g1548 436 PRINTS Pyridine nucleotide disulphide reductase class-II signature 202 226 - -
Dod08g1548 436 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 27 423 - -
Dod08g1548 436 SUPERFAMILY FAD/NAD(P)-binding domain 41 275 IPR036188 -
Dod08g1548 436 Gene3D - 40 420 IPR036188 -
Dod08g1548 436 PRINTS FAD-dependent pyridine nucleotide reductase signature 40 59 - -
Dod08g1548 436 PRINTS FAD-dependent pyridine nucleotide reductase signature 206 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1548 Dod-Chr8 35096708 35101415 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1548 K11816 - gmx:100804746 772.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1548 08 35096708 35101415 Dod08g1548 08 35096708 35101415 ECH