Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1543 ATGGCTCAACTCTATGTCCCTGCACTTGAGCCTTTGAAATTACACTCATGCAAGCTCCCACAAATCCCTTCCTCCTTCTTGTCTCACCTTCCTCCCCTTCGTCCCACCTTCTTCAACTCCAAACCCTCTCTCACTCTCGCATCTCCCCACCACCCTCATATTCATCAACCCCTTCTACTACCCATTCTCCGTTCCCCAACTCGCACTCTATGCAGCATGCACAAATCAGATATGATTTCGCAGCTTGAGCTTGGGAAACCGGAGCAAATGCGGAAACCGGAGAAGCGAGTCAACGGGATATTCTGGATCATACTCGTCAACATTGGGATATACGTTGCTGACCATTTTTTTCAGGTTAATGGCATCAAGGCTTTGTACTTGTACCACAACTGGCCTGCTTGGTACCAGTTTGTCACAGCAACATTTTGTCATGCTAATTGGAAGCACCTTTCCAGCAACCTTTTCTTCTTGTACATTTTTGGAAAGCTTGTTGAAGAAGAGGAAGGAAACTTAGCCTTGTGGATTTCTTACATTCTTACTGGCGTTGGAGCAAATCTTGTGTCATGGTTGGTTTTACCGAGAAATAGTGTTTCTGTTGGAGCTTCTGGTGCTGTTTTTGGGTTATTTACTATCAGTGTTCTTGTAAAGATGTCCTGGGATTGGAGGAAGATCCTTGAAGTGCTTATACTGGGTCAGTTTGTTATAGAAAAGGTGATGGAAGCAGCCCAAGCTTCAACATCATTATCAGGCACCTTTCGTGGAGGCTACTCATTGCAAGGTGTCAATCATATTGCACATCTTTCTGGTGCTCTTGTTGGTGTGCTTTTGGTTTGGCTGCTGAGTAAAATTCCTTCTGATCCCTCAGACAAATGA 873 0.4479 MAQLYVPALEPLKLHSCKLPQIPSSFLSHLPPLRPTFFNSKPSLTLASPHHPHIHQPLLLPILRSPTRTLCSMHKSDMISQLELGKPEQMRKPEKRVNGIFWIILVNIGIYVADHFFQVNGIKALYLYHNWPAWYQFVTATFCHANWKHLSSNLFFLYIFGKLVEEEEGNLALWISYILTGVGANLVSWLVLPRNSVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTSLSGTFRGGYSLQGVNHIAHLSGALVGVLLVWLLSKIPSDPSDK* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1543 290 SUPERFAMILY Rhomboid-like 98 283 IPR035952 -
Dod08g1543 290 Pfam Rhomboid family 134 283 IPR022764 GO:0004252|GO:0016021
Dod08g1543 290 Gene3D - 94 285 IPR035952 -
Dod08g1543 290 PANTHER RHOMBOID-RELATED PROTEIN 46 289 - -
Dod08g1543 290 PANTHER RHOMBOID-LIKE PROTEIN 11, CHLOROPLASTIC-RELATED 46 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1543 Dod-Chr8 35023971 35027066 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1543 - - adu:107495220 441.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1543 08 35023971 35027066 Dod08g1543 08 35023971 35027066 ECH