Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1508 ATGGATCCCCAAAGCCCGAAGAGCCCCCTCAGAGTCCACCTAGTATCCTCTACCGACTCGCCCGAGTTCGCTCACCTGAGTCGTGCCCTGACTCGGTCCTCACTCGTCGGTCTCGACGCGGAGTGGAAACCCGTCCGAACTCACCAAACATCGTTCCCCACCGTCTCGTTGCTCCAAATCGCGTGCCAACTCGGTGGCGGCAGCGACTCGGAACCTGACTCGGCGGTCTTCCTGCTGGACCTCCTTTCCCTCCCGCTCCCTTCGCTATGGGAACCGCTTCGAGAAATGCTCGAATCCCCCCATATCTTGAAACTCGGGTTCAAATTCAAGCAAGATTTGATATACTTGTCCTCCACCTTCTGTTCCCAAGGCTGCGATCCTGGTTTCAACAAGGAACTCCAATGTAGTGATTGGTCATGCCGTCCTCTTACAGAAGAGCAGATGACATATGCAGCAATGGATGCTCAATGCTTGCTTGAAATATTTAAGGACTTCCAAGCAAAGATTGCCAATGAAGGACACTTTTCTGGCAAGACAACTGAATTGTCTAACGCTGATGCAAATCTTGGGTTGAAAGAGGATTTTGCGAAGCATAATTTGAGTGATAAAATCCTAGGAACACAATTTTCTGAAGCTCTAGTTATTGTCCAAGCCACTACTTCTGATGCATCTCAGGTTGTGAGAAAATATGGTGATAGAATTTTGCTAAAGGAGTCGGACAAAACACCCGGGACCTCAAAAAAGAAAGGGAAAAAGCGGTCACCAATTAATGGGATTCACAAAGAAAAACATCTAGAGAAAGCTGAAGAATGGCATGGTCCCTCACCTTGGGATCCATCAGTGGGGGGTGATGGGTATCCGAAGTTCCTTTGTGATGTTATGGTTGAAGGCTTGGCAAAGCATTTACGGTGTGTTGGGATTGATGCTGCAATTCCTTATTCAAAGAAGCCTGACCCAAGGGAGTTGATAGAGCAAGCACATAAAGAGAAAAGAGTTCTTTTGACACGAGATGCCAAGTTGCTAAGATATGAGTATCTAATAAAACACCAAATATATAAAGTGAAGAGTCTTCTAAAAAATGAGCAGCTACTTGAGGTCCTTGAAACATTTCAACTCAAAATTAGTGAGGATCAGCTAATGTCAAGGTGCACAAAATGTAATGGTAGATTTATTCAGAAGCCACTGTCAACTGAAGAGGCTATTGAAGCTGCAAAGGGTTTTCAGAAAATTCCAGATTGCTTATTTAACAAGAATCTTGAGTTTTGGCAGTGCATGGACTGTCACCAACTATATTGGGAGGGAACCCAGTACCGTAATGCAGTACAGAAGTTCATTGACGTTTGCAAGTTAAGTGATTAA 1359 0.4511 MDPQSPKSPLRVHLVSSTDSPEFAHLSRALTRSSLVGLDAEWKPVRTHQTSFPTVSLLQIACQLGGGSDSEPDSAVFLLDLLSLPLPSLWEPLREMLESPHILKLGFKFKQDLIYLSSTFCSQGCDPGFNKELQCSDWSCRPLTEEQMTYAAMDAQCLLEIFKDFQAKIANEGHFSGKTTELSNADANLGLKEDFAKHNLSDKILGTQFSEALVIVQATTSDASQVVRKYGDRILLKESDKTPGTSKKKGKKRSPINGIHKEKHLEKAEEWHGPSPWDPSVGGDGYPKFLCDVMVEGLAKHLRCVGIDAAIPYSKKPDPRELIEQAHKEKRVLLTRDAKLLRYEYLIKHQIYKVKSLLKNEQLLEVLETFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAIEAAKGFQKIPDCLFNKNLEFWQCMDCHQLYWEGTQYRNAVQKFIDVCKLSD* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1508 452 Pfam 3'-5' exonuclease 124 169 IPR002562 GO:0003676|GO:0006139|GO:0008408
Dod08g1508 452 Pfam 3'-5' exonuclease 17 119 IPR002562 GO:0003676|GO:0006139|GO:0008408
Dod08g1508 452 Gene3D - 124 192 IPR036397 GO:0003676
Dod08g1508 452 SUPERFAMILY Ribonuclease H-like 9 174 IPR012337 -
Dod08g1508 452 Gene3D - 4 123 IPR036397 GO:0003676
Dod08g1508 452 PANTHER 3'-5' EXONUCLEASE DOMAIN-CONTAINING PROTEIN 224 449 - -
Dod08g1508 452 PANTHER 3'-5' EXONUCLEASE DOMAIN-CONTAINING PROTEIN 130 220 - -
Dod08g1508 452 PANTHER 3'-5' EXONUCLEASE DOMAIN-CONTAINING PROTEIN 5 127 - -
Dod08g1508 452 Pfam Mut7-C RNAse domain 287 443 IPR002782 -
Dod08g1508 452 MobiDBLite consensus disorder prediction 238 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1508 Dod-Chr8 32029736 32051080 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1508 K09122 - qsu:112008847 613.609