Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1491 ATGTCAAAGGCGGTGGTTTATGTCCTAATAGCCACCGCCACATTGCTCTTCATAGTCCTATCCCCATTGAACCCCGAGGGGCACAAAGGTCGCCTTAGCCGCAGGCTTGGCTACAAGCTACGTGAGCGAGCACCACATTTCGACCCTCTTGTGACAAAGATTGAGAGAGAGGCTGAAAACAAAGAGCAAAATCATAATGCTAATAGCAGTAATGCGCCCACTCCTTCCCCTCGTGGTTTGGACAACACCTCATCGGTTAAGGAGGTTGCGGAGACGTACCAATATCTTACCTCGGGTGGGACATTGAACACGACGCTGAGGTTGATCATTTTGTTCCCTTTGCTTGATAGGGAACCGAAAGATGGTGTGGTTAGCTTCAATGAGTTGAGAGCTTGGATTACTCAACGGGCTTTGGAGAGATTGGCTTATGTCACGCAGGCTGAGTTGGAGTCCAAGGACAAGGATGGGGATTTGGCCTTATCTCTTAGGGAGTATGTGCCTCAGTTTTCTGACAAGGATATAGAGAAAAAAGAAATGGGGCATGGTGAAGCAGGATGGTGGATGGAGCAATTTGAAATTGCAGACCTTGATCACAATGGGCTTCTTAACTTCACAGAGCTTAGAGACCTTTTGCACCCAGAAGACAGCCAAAATCAAGATATACTGAAATGGATGCTGAAAGATAGACTTCAGCGCATGGATGATGAAATTGATGGGAAACTGAACTTCAAAGAATTTGAAGACCATGTATATGATACATACGAAAGTTATGTTGACTTTGAAACTAATGGAGGGGATGTACCTGATGCAGAGGATAAATTTGCTGAGCTTGATGTGAACAAGGACAAATTCCTGTCACCTGAAGAATTGATACCGATAATTCCTTATCTCTACCCCGGAGAGCTAGCTCATGCTAAATATTTCACGTACTATTTAATGAATGAGGCCGATGATAATGGAGATGGAAAATTGTCACTCCAGGAGATGCTTAATCATGAGTTTATTTTCTACAACACAGTTCATGCTGATGGCCATCAGGAAAGCGATGATGATCATGATGAGCTTTGA 1068 0.4419 MSKAVVYVLIATATLLFIVLSPLNPEGHKGRLSRRLGYKLRERAPHFDPLVTKIEREAENKEQNHNANSSNAPTPSPRGLDNTSSVKEVAETYQYLTSGGTLNTTLRLIILFPLLDREPKDGVVSFNELRAWITQRALERLAYVTQAELESKDKDGDLALSLREYVPQFSDKDIEKKEMGHGEAGWWMEQFEIADLDHNGLLNFTELRDLLHPEDSQNQDILKWMLKDRLQRMDDEIDGKLNFKEFEDHVYDTYESYVDFETNGGDVPDAEDKFAELDVNKDKFLSPEELIPIIPYLYPGELAHAKYFTYYLMNEADDNGDGKLSLQEMLNHEFIFYNTVHADGHQESDDDHDEL* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1491 355 Gene3D - 253 334 - -
Dod08g1491 355 MobiDBLite consensus disorder prediction 59 84 - -
Dod08g1491 355 Pfam Secreted protein acidic and rich in cysteine Ca binding region 273 329 IPR019577 GO:0005509
Dod08g1491 355 SUPERFAMILY EF-hand 183 332 IPR011992 -
Dod08g1491 355 PANTHER CALCIUM-BINDING EF HAND FAMILY PROTEIN 1 355 - -
Dod08g1491 355 SUPERFAMILY EF-hand 106 167 IPR011992 -
Dod08g1491 355 SMART efh_1 308 336 IPR002048 GO:0005509
Dod08g1491 355 SMART efh_1 186 214 IPR002048 GO:0005509
Dod08g1491 355 SMART efh_1 269 297 IPR002048 GO:0005509
Dod08g1491 355 SMART efh_1 225 253 IPR002048 GO:0005509
Dod08g1491 355 ProSitePatterns EF-hand calcium-binding domain. 195 207 IPR018247 -
Dod08g1491 355 ProSitePatterns EF-hand calcium-binding domain. 278 290 IPR018247 -
Dod08g1491 355 ProSitePatterns EF-hand calcium-binding domain. 317 329 IPR018247 -
Dod08g1491 355 Pfam EF hand 190 210 IPR002048 GO:0005509
Dod08g1491 355 ProSiteProfiles EF-hand calcium-binding domain profile. 265 300 IPR002048 GO:0005509
Dod08g1491 355 Gene3D - 79 252 - -
Dod08g1491 355 ProSiteProfiles EF-hand calcium-binding domain profile. 182 217 IPR002048 GO:0005509
Dod08g1491 355 PANTHER RETICULOCALBIN 1 355 - -
Dod08g1491 355 MobiDBLite consensus disorder prediction 64 84 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1491 1 316 EF-hand Containing Proteins AT4G27790 42.724 4.79e-86 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1491 K23901 - gmx:100806007 548.125