Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1465 ATGGCCACACTTCAAGCTTGTCTCCTCTCGAAACCTTCCCTCCCATTACCATTCCCATTCCCATTCCCCTCTCTTCGCCACCCCACATTCTCCCTTCACCACCACTCCTTCAATCCCCTTCCCCCATCTTATCCCCACCTCAGGCGACTCCGCTCGCGCGTCCCCTCTACCTCCCGCTGCACATTCCGCCCCGACGGCCTAACCTCCCCCTCCGAACCTGAACCCCAACCCACCGCGCCCACTACCGCCGAACCTGATTCCCCCGAACCGGACGCCGTTAACGCCGTCGACACCAAGATCACAAATCCAACGGAAGAACTCGCAGTTTCAGATTGGAACGTCCCAAGTTCGGAATTTGCTGAGGAAGAATTTGTTGATAGTGAAGAAGGGAAGAGTGCGAATCTGACGAAGAAGAAGGAGGAGGAGGGGTTTGTTGTTGATTCTAGGTTGCCGTTAGTGGTGTTCTTTGTCGGGTTGTGGGCGAGGGCGAGGGAAATGGTGAGAAGAGCTTTCTCGGAGTTCTTGGATTGGTGGCCGTTTTGGCGTCAGGAGAAGCGGCTGGCGCGGTTGATTGCCGAGGCCGACGAGAACCCGCAGGACACCGCGAGGCAGAGCGCCCTGTTCGTTGAGCTCAACAAGCACAGTCCTGAGTCTGTCATCAAGCGATTTGAACAAAGGGACTGTGCTGTGGACAGTAGAGGAGTTGCAGAGTATCTTCGAGCTCTTGTAATGACTAATTCTATTGCCGAATATCTCCCAGACGAGGAAGCCGGGAAACCTTCTAGCCTTCCTACTCTGTTGCAAGAGTTGAAGCAGCGTGCCTCGGGTAACTCAGATGAGACTTTTCTTAGCCCTGGAATATCTGAGAAGCAGCCATTACACGTGATGATGGTCGAACCAAAAGCGTCAAACAAATCACGTTTTGCCCAAGAGCTAATTTCAACTATTTTGTTTACTGTTGCTGTGGGATTGGTCTGGTTTATGGGCGCTGCTGCACTTCAAAAGTACATAGGAAGTTTGGGCGGCATTGGAACTTCAGGTGTTGGCTCAAGTTCTTCCTATGCCCCAAAGGAACTAAATAAAGAAGTGATGCCTGAAAAGAATGTCAAAACATTCAAGGATGTCAAAGGCTGTGATGATGCAAAGCAAGAACTTGAGGAGGTTGTAGAGTACCTAAAAAATCCAGCTAAGTTCACGCGGCTTGGAGGAAAGCTGCCAAAGGGGATTCTCTTGACTGGAGCACCTGGAACTGGGAAAACTCTTCTTGCCAAGGCTATTGCTGGAGAAGCTGGTGTTCCATTTTTCTATCGGGCAGGGTCTGAATTTGAGGAGATGTTTGTCGGAGTTGGTGCTCGACGTGTAAGATCCTTATTTCAAGCAGCCAAAAAAAAGGCTCCTTGTATCATTTTCATTGATGAAATTGATGCTGTTGGATCAACAAGGAAACAGTGGGAGGGCCATACGAAGAAGACACTGCATCAGCTACTTGTTGAAATGGATGGGTTTGAGCAGAATGAGGGAATAATATTAATGGCAGCAACAAACTTGCCTGATATTCTTGATCCAGCTTTAACAAGACCTGGTAGATTTGATCGTCATATTGTTGTACCGAATCCAGATGTTCGTGGTCGGCAAGAAATATTGGAGCTCTACTTGCAAGATAAACCTCTAGCTGATGATGTAGATATTAAAGCAATAGCTCGGGGTACCCCAGGCTTCAATGGGGCAGATCTTGCAAACCTGGTAAACATTGCTGCCATTAAAGCTGCGGTTGAAGGCGCAGACAAACTAACTGCTGCACAGTTGGAATTTGCAAAAGATAGAATCATTATGGGTACCGAACGGAAAACATTGTTTATATCAGATGAGTCAAAAATGCTTACTGCTTATCATGAGAGTGGCCATGCAATTGTTGCCCTTAATACTGATGGTGCACATCCAATTCACAAGGCAACAATCATGCCACGAGGCTCTGCTTTAGGTATGGTCACCCAGCTACCTTCAAGTGATGAGACATCAATTAGCAAGAAACAGTTGTTAGCTCGCCTTGATGTATGTATGGGAGGAAGAGTTGCAGAAGAGCTTATCTTTGGTCAGGATTATGTCACAACTGGAGCAAGTAGTGACCTTCACACGGCAACTGAGCTTGCCCAATATATGGTATCCAATTGTGGGATGAGTGATGCAATTGGGCCAGTTCATATAAAAGAGCGGCCAAGTTCTGAAATGCA 2231 0.4792 MATLQACLLSKPSLPLPFPFPFPSLRHPTFSLHHHSFNPLPPSYPHLRRLRSRVPSTSRCTFRPDGLTSPSEPEPQPTAPTTAEPDSPEPDAVNAVDTKITNPTEELAVSDWNVPSSEFAEEEFVDSEEGKSANLTKKKEEEGFVVDSRLPLVVFFVGLWARAREMVRRAFSEFLDWWPFWRQEKRLARLIAEADENPQDTARQSALFVELNKHSPESVIKRFEQRDCAVDSRGVAEYLRALVMTNSIAEYLPDEEAGKPSSLPTLLQELKQRASGNSDETFLSPGISEKQPLHVMMVEPKASNKSRFAQELISTILFTVAVGLVWFMGAAALQKYIGSLGGIGTSGVGSSSSYAPKELNKEVMPEKNVKTFKDVKGCDDAKQELEEVVEYLKNPAKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDIKAIARGTPGFNGADLANLVNIAAIKAAVEGADKLTAAQLEFAKDRIIMGTERKTLFISDESKMLTAYHESGHAIVALNTDGAHPIHKATIMPRGSALGMVTQLPSSDETSISKKQLLARLDVCMGGRVAEELIFGQDYVTTGASSDLHTATELAQYMVSNCGMSDAIGPVHIKERPSSEM 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1465 743 SUPERFAMILY FtsH protease domain-like 620 740 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Dod08g1465 743 MobiDBLite consensus disorder prediction 54 94 - -
Dod08g1465 743 Gene3D - 539 612 - -
Dod08g1465 743 Gene3D - 349 538 IPR027417 -
Dod08g1465 743 Pfam Peptidase family M41 619 739 IPR000642 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Dod08g1465 743 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE YME1L1 143 743 - -
Dod08g1465 743 SMART AAA_5 405 540 IPR003593 -
Dod08g1465 743 Gene3D Peptidase M41 613 743 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Dod08g1465 743 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 371 636 IPR027417 -
Dod08g1465 743 ProSitePatterns AAA-protein family signature. 508 526 IPR003960 GO:0005524|GO:0016887
Dod08g1465 743 CDD AAA 383 537 - -
Dod08g1465 743 Pfam AAA+ lid domain 560 602 IPR041569 -
Dod08g1465 743 TIGRFAM FtsH_fam: ATP-dependent metallopeptidase HflB 319 738 IPR005936 GO:0004176|GO:0004222|GO:0016020
Dod08g1465 743 MobiDBLite consensus disorder prediction 70 84 - -
Dod08g1465 743 Pfam ATPase family associated with various cellular activities (AAA) 409 537 IPR003959 GO:0005524|GO:0016887
Dod08g1465 743 PANTHER METALLOPROTEASE M41 FTSH 143 743 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1465 Dod-Chr8 29735693 29772591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1465 32 743 Miscellaneous Gene Families AT5G53170 75.350 0.0 1045
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1465 K08955 - gmx:100815980 1102.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1465 08 29735693 29772591 Dod08g1465 08 29735693 29772591 ECH