Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1452 ATGTCAAACTCTCTCTCGCTGACGTTCTCGGCTCTCAACAACCCCCAGCTCAATGGTCTCGGAAAGCGTAACACGCGCCTGTGCCCGGTCACGAGCCTCGCCAGCCTCCGAAGCAGAGTCAGGCGGTGCTACGCTTCGTCCACGTCAGTGGACAAGAAGAGGCTCTTCGGCCCGCAGTTGCGTTCGAGTGGGTCCGAAAGGATTCACTTGTGGCAACCGACCGGGCCGGGTCGGATACCAAAGCTCAAGGTGGCGGTCCGATCAGCATTCTCGGCGGAGCCGGAGAAGCCGCTGGGGCTGTACGATCCCGCAATGGATAAGGACTCGTGCGGGGTGGGGTTCGTTGCTGAGTTGTCTGGTCAAAGTAGCCTCAAAACGGTAACGGATGCGTTAGAGATGTTGGTGCGCATGACGCACAGAGGTGCTTGCGGATGCGAGGCAAACACTGGAGATGGAGCCGGAATTCTTGTGGCTCTGCCTCATGAGTTTTACAAGGAGGTAGTGGATTTTGAGCTTCCTTCCCAAGGAAAATATGCAGTTGGCATGCTTTTCTTGCCTAAATCTGATACACATAGGATGCAAAGCAAAAATATATTTGAAAAGGTTGCTGAGAGTCTTGGCCACTCAGTTCTTGGTTGGCGCTCTGTGCCCACAGATAACACAGGATTGGGCAAATCAGCCCTGCAGACTGAACCAGTGATTGAACAGGTGTTTCTTACTCCAAGTGCTCAATCAAAAGTTGATTTGGAAAGACAGATGTACATATTAAGGAAGCTCGGCATGGTTGCTGTTACATCTGGATTGAATCTCGAAAATGATGGCATCGCTGATTTCTATATCTGTTCACTTTCGTCAAGGACTATTGTTTACAAAGGACAGCTTACACCAGCTCAGTTGAGGGATTATTATTTTGCTGACCTTGGCAATGAAAGGTTTACGAGCTACATGGCCCTGATACATTCACGATTTTCAACAAATACTTTCCCTAGCTGGGATCGTGCCCAGCCTATGCGCATATTAGGCCACAATGGAGAAATTAACACTCTTAGAGGCAACATCAACTGGATGAAAGCACGTGAGGGCTTACTGAAATGCACGGAGCTTGATTTATCAGAGAATGAGTTAAAGAAGCTTTTGCCCATTGTGGATGCAAATTCATCTGATTCAGGTGCTTTTGACGGTGTGCTTGAGTTTTTGGTTCAATCTGGAAAAAGTCTTCCAGAAGCTGTTATGATGATGATTCCTGAGGCATGGCAAAATGACAAAAACATGGATCCTCAGCGTAAAGCATTTTATGAATACTACTCAGCCCTCATGGAGCCATGGGATGGGCCAGCTCTTATATCATTTACCGATGGTCATTATCTCGGAGCAACATTGGATAGGAATGGACTGCGACCAGGCCGATTCTATGTCACTCACAGTGGACGAGTCATAATGGCAAGTGAGGTTGGAGTTGTAGATGTTCCTCCTGAAGATGTGTGTAGGAAAGGAAGACTAAATCCTGGCATGATGCTTCTGGTTGATTTCGAGAAGCACATTGTTGTAGATGATGATGCCTTAAAGGAGCAGTACTCATTGGTAAGGCCTTATGGTGATTGGCTCAAAAAGCAAAAGATTGAACTCAAAGACATAGTTGACTCTGTTCACAAATCTGACATAGCAGGAGTGCCTCCACTATCCAGTGATGAAGTGGACATAGAAAATATGGGAATTCATGGTTTACTGGCTCCATTGAAAGCTTTTGGATATACGGTTGAATCATTGGAAATGCTATTACTTCCCATGGCAAAAGATGGTGTAGAGGCCCTTGGGTCAATGGGAAATGATACTCCATTAGCAGTCATGTCTAATAGAGAAAAACTCACTTTTGAGTACTTCAAACAAATGTTTGCTCAAGTGACAAACCCTCCAATTGATCCTATTCGAGAGAAAATAGTTACTTCCATGGAATGCATGGTTGGCCCAGAAGGTGACCTGACAGAAACCACAGAGGAACAATGCCACCGACTTTCACTGAAAGGTCCCCTTTTATCCAGTAAAGAAATGGAAGCCGTTAAAAAGATGAATTATCGGGGATGGCAGAGCAAAGTTATTGACATAACTTACTCAAAGGAATGTGGTATGAGAGGATTGGAAGAAGCCTTGGACAGGATATGTGCAGAAGCACATGTTGCAATTAATGAAGGCTACACAACCCTTTTGCTTTCTGATAGAGCTTTCTCAAGGAAACGTGTTGCTGTGAGCTCCCTCCTGGCTGTTGGTGCTGTCCATCAACATCTTGTTAAAACACTTGAGCGCACTAGAGTTGCCATAATAGTTGAGTCTGCCGAGCCACGTGAAGTCCACCATTTCTGTACACTTGTCGGTTTTGGCGCTGATGCTATATGCCCATATTTGGCTTTAGAGGCAATTTGGAGACTTCAGGTTGATGGAAAGATCCCACCAAAAGAAAGTGGTGAATTATACTCAAAAGATGAGTTGGTCAAGAAGTATTTCAAAGCAAGCAATTATGGCATGATGAAGGTTCTTGCCAAGATGGGAATATCAACTTTGGCATCTTACAAAGGTGCTCAGATTTTTGAAGCTCTGGGTCTTTCATCAGAAGTGATAGAAAAGTGCTTTGCTGGAACCCCCAGTCGAGTTGAGGGTGCTACATTTGAGATGCTTGCTTGTGATGCTCTACGACTGCATGAATTGGCATTTCCTTCTCGGGTTTTCTCTCCGGGAAGTGCTGAGGATGTTGCATTGCCAAATCCTGGGGATTATCATTGGAGAAAAGGTGGCGAAGTTCACCTGAATGATCCACTTGCCATAGCAAAGCTACAGGAGGCTGCCAGAACTAACAGTGTAGATGCATATAAGCAATATTCTAAGCTCATTCATGAATTGAACAAAGCTTGCAATTTGCGGGGGATTCTAAAGTTTAAAGAGACATCAGTGAAGATTCCCATTGATGAAGTGGAACCTGCCAGCGAAATAGTTAAACGGTTTTGCACTGGGGCCATGAGTTATGGATCAATATCATTGGAGGCGCACACAGCACTTGCAATGGCTATGAATAAAATTGGAGGGAAATCAAACACAGGCGAGGGAGGTGAGCAGCCATCGCGTATGGAGACTCTTCCTGATGGTTCAATGAATCCTAAAAGAAGTGCCATCAAACAAGTTGCTAGTGGGAGATTTGGAGTTTCAAGTTACTACCTTACTAATGCTGATGAACTACAGATAAAGATGGCCCAGGGTGCAAAACCTGGCGAGGGAGGAGAACTACCTGGCCACAAAGTTATAGGAGACATTGCCATCACTAGGAATTCAACTGCTGGAGTAGGACTTATAAGTCCACCTCCCCATCATGATATTTATTCAATTGAAGACCTGGCCCAGTTAATTTATGATTTGAAGAATGCCAATCCAGCTGCTCGAATTAGTGTGAAGTTAGTATCTGAAGCTGGGGTGGGGATAATAGCTAGCGGAGTTGTTAAAGGTCATGCTGACCATGTCTTGATCTCAGGTCATGATGGAGGTACAGGGGCATCCAGATGGACTGGTATAAAAAATGCTGGGCTGCCTTGGGAACTCGGCCTAGCTGAGACCCACCAGACATTGGTTGCTAATGACCTACGTGGTCGTACAGTTCTTCAAACTGATGGGCAACTCAAAACTGGAAGAGATGTAGCGATAGCTGCCCTTCTTGGTGCAGAAGAGTTTGGTTTCAGTACAGCTCCACTCATTACCCTTGGCTGCATCATGATGCGGAAGTGTCACAAGAACACCTGCCCTGTTGGCATTGCCACCCAAGATCCAGTACTCAGAGAAAAATTTGCTGGGGAACCTGAGCATGTTGTTAACTTCTTTTTCATGGTAGCAGAAGAGATGAGAGAGATTATGTCGAACCTTGGTTTTAAAACTGTTAATGAGATGGTTGGTCGATCGGATATGCTTGAAGTTGATAAAGAAGTTGTTAAGAGCAATGAGAAACTGGAGAACATTGATCTCTCTCTATTGCTTAGACCTGCAGCTGAAATACGACCAGAAGCTGCACAACACTCTGTGCAAAATCAAGATCATGGTTTGGACATGGCCTTGGATAATAAGCTCATCAGTCTGTCAAACCCTGCTTTAGAAAAGGGTCTCCCTGTGTACATTGAAACACCAATCCATAATGTAAACCGTGCTGTTGGAACTATGCTTAGCCATGAGGTGACTAAACAATACCACTTAGCTGGTCTCCCAACTGACACCATCCATATCAGATTTACTGGCAGTGCAGGCCAGAGCTTTGGTGCATTCCTCTGTCCTGGCATCACTTTGGAACTTGAAGGTGACGGCAATGATTATGTTGGTAAAGGATTATCTGGAGGCAAAATTGTAGTATATCCCCCAATAAGAAGCAACTTTGACCCCAAGGAGAACATTGTAATTGGTAATGTGGCACTATATGGAGCTACACGTGGTGAAGCCTATTTCAATGGGATGGCAGCAGAAAGATTTTGTGTCCGCAATTCTGGGGCTAAGGCAGTTGTGGAAGGTGTTGGTGATCATGGATGTGAGTACATGACTGGTGGTACTGTTGTTGTGCTTGGTAAAACTGGTAGAAATTTTGCAGCAGGTATGAGTGGTGGGATTGCTTATGTTCTTGACGTGGATGGAAAATTCCAATCTCAATGTAATCTTGAGCTAGTAGATCTGGATAAGGTTGAGGAGGAAGAGGATATTATCACCCTTAGAATGTTGATACAGCAACATCAACGGCACACTAATAGTGTGCATGCAAAAGAAGTGCTTTCTAATTTCAAGAATCATCTTCCCAAATTTATTAAGGTGTTCCCAAGGGAGTATAAACGTGTACTCGCAAGTATGAAGTCTGCAGAGGCCTCCAAAGATGCAACGGAGTGTGCCGTGGAAGATGTGGAACAAAAAGGCGATGAAGCACAGGCTGTGGAGAAGGATGCTTTTGAAGAGCTTAAGAAACTGACAACTTCATCGTTGAATGACAAATTAAACCGGGCTGTATCACCCAAGAGGCCAAGTCAAGTCACTGATGCCATTAAACATAGAGGTTTTGTTGCTTATGAGCGTGAGGGTGTTCAGTATAGGGATCCAAATATTCGCATGAATGATTGGAAGGAAGTGATGGAAGAGACAAAGCCTGGTCCGCTTTTGAAAACACAGTCAGCTCGATGCATGGACTGTGGCACTCCTTTCTGTCATCAGGAAAATTCTGGATGTCCTCTTGGAAATAAAATACCTGAATTTAATGAGCTAGTGTACCACAATAGGTGGCGTGAAGCATTAGAGAGGCTTCTTGAAACAAATAACTTTCCTGAATTTACTGGGCGGGTGTGCCCAGCACCTTGTGAAGGTTCTTGTGTCCTTGGTATCATTGAGAATCCGGTATCTATTAAAAGCATTGAATGTGCTATCATAGACAAGGCTTTTGAGGAGGGTTGGATGGTGCCACGACCTCCAGTCAGGAGAACTGGGAAAAGAGTCGCCATTGTTGGAAGTGGACCAGCTGGCTTGGCAGCTGCTGATCAACTAAATAAAATGGGACATGCAGTAACTGTGTATGAAAGAGCTGACAGGATTGGAGGGCTGATGATGTACGGGGTCCCCAACATGAAAACTGACAAAGTGGATATAGTTCAACGACGAGTCAACCTTATGACTGAGGAAGGGATAAATTTTGTGGCGAATGCAAACGTAGGACATGATCCTTTATACTCTCTTGATGGGCTACGAGAGGAAAATGATGCCATTGTCTTGGCTGTAGGAGCCACAAAACCAAGGGATCTTCCTGTACCTGGACGGGAGCTGTCTGGAGTTCATTTTGCCATGGAGTTTCTTCATGCAAACACTAAAAGCTTGCTTGATAGCAATCTTCAGGATGGTGACTACATCTCTGCCAAGGGCAAGAAAGTTGTCGTTATAGGAGGGGGTGACACTGGTACAGATTGCATAGGGACATCCATTCGTCACGGCTGTAGTAGCATCATAAATCTGGAACTTCTCCCTGAGCCACCACAAACAAGAGCCCTAGGCAACCCTTGGCCTCAGTGGCCTCGCATATTCCGTGTAGATTACGGACACCAAGAAGCTGCTTCTAAATTTGGCAAAGATCCAAGATCATATGAGGTACTGACTAAGCGGTTTGTGGGAGATGAAAATGGAATTGTGAAAGGACTTGAAGTGGTGCGTGTCCGCTGGGAGAAGGATCAAACTGGCAAGTTTCAGTTTAAGGAAATTGAGGGTACTGGGGAGATTATTGAGGCTGACCTAGTTTTACTAGCCATGGGTTTCCTTGGCCCTGAGTCCACAATTGCAGAGAAGCTGGGTGTGGAGCGAGACAACCGTTCAAACTTCAAGGCTGATTATGGTCGCTTCTCAACCAGCGTCAAAGGGGTGTTTGCAGCGGGGGACTGTCGCCGCGGCCAGTCCCTGGTGGTATGGGCTATTTCAGAGGGACGGCAAGCTGCTGCACAAGTCGACAAGTATCTCATTGAACAAAACAGAGATCAAAATGCTGCTGGGAGTGAGGGTGAACCTGTCAAGAGGCAGCAGGACCTCAACAAGAGGCACCAGGACAGCAGCAAACACACAGTGATGACTTAG 6615 0.4547 MSNSLSLTFSALNNPQLNGLGKRNTRLCPVTSLASLRSRVRRCYASSTSVDKKRLFGPQLRSSGSERIHLWQPTGPGRIPKLKVAVRSAFSAEPEKPLGLYDPAMDKDSCGVGFVAELSGQSSLKTVTDALEMLVRMTHRGACGCEANTGDGAGILVALPHEFYKEVVDFELPSQGKYAVGMLFLPKSDTHRMQSKNIFEKVAESLGHSVLGWRSVPTDNTGLGKSALQTEPVIEQVFLTPSAQSKVDLERQMYILRKLGMVAVTSGLNLENDGIADFYICSLSSRTIVYKGQLTPAQLRDYYFADLGNERFTSYMALIHSRFSTNTFPSWDRAQPMRILGHNGEINTLRGNINWMKAREGLLKCTELDLSENELKKLLPIVDANSSDSGAFDGVLEFLVQSGKSLPEAVMMMIPEAWQNDKNMDPQRKAFYEYYSALMEPWDGPALISFTDGHYLGATLDRNGLRPGRFYVTHSGRVIMASEVGVVDVPPEDVCRKGRLNPGMMLLVDFEKHIVVDDDALKEQYSLVRPYGDWLKKQKIELKDIVDSVHKSDIAGVPPLSSDEVDIENMGIHGLLAPLKAFGYTVESLEMLLLPMAKDGVEALGSMGNDTPLAVMSNREKLTFEYFKQMFAQVTNPPIDPIREKIVTSMECMVGPEGDLTETTEEQCHRLSLKGPLLSSKEMEAVKKMNYRGWQSKVIDITYSKECGMRGLEEALDRICAEAHVAINEGYTTLLLSDRAFSRKRVAVSSLLAVGAVHQHLVKTLERTRVAIIVESAEPREVHHFCTLVGFGADAICPYLALEAIWRLQVDGKIPPKESGELYSKDELVKKYFKASNYGMMKVLAKMGISTLASYKGAQIFEALGLSSEVIEKCFAGTPSRVEGATFEMLACDALRLHELAFPSRVFSPGSAEDVALPNPGDYHWRKGGEVHLNDPLAIAKLQEAARTNSVDAYKQYSKLIHELNKACNLRGILKFKETSVKIPIDEVEPASEIVKRFCTGAMSYGSISLEAHTALAMAMNKIGGKSNTGEGGEQPSRMETLPDGSMNPKRSAIKQVASGRFGVSSYYLTNADELQIKMAQGAKPGEGGELPGHKVIGDIAITRNSTAGVGLISPPPHHDIYSIEDLAQLIYDLKNANPAARISVKLVSEAGVGIIASGVVKGHADHVLISGHDGGTGASRWTGIKNAGLPWELGLAETHQTLVANDLRGRTVLQTDGQLKTGRDVAIAALLGAEEFGFSTAPLITLGCIMMRKCHKNTCPVGIATQDPVLREKFAGEPEHVVNFFFMVAEEMREIMSNLGFKTVNEMVGRSDMLEVDKEVVKSNEKLENIDLSLLLRPAAEIRPEAAQHSVQNQDHGLDMALDNKLISLSNPALEKGLPVYIETPIHNVNRAVGTMLSHEVTKQYHLAGLPTDTIHIRFTGSAGQSFGAFLCPGITLELEGDGNDYVGKGLSGGKIVVYPPIRSNFDPKENIVIGNVALYGATRGEAYFNGMAAERFCVRNSGAKAVVEGVGDHGCEYMTGGTVVVLGKTGRNFAAGMSGGIAYVLDVDGKFQSQCNLELVDLDKVEEEEDIITLRMLIQQHQRHTNSVHAKEVLSNFKNHLPKFIKVFPREYKRVLASMKSAEASKDATECAVEDVEQKGDEAQAVEKDAFEELKKLTTSSLNDKLNRAVSPKRPSQVTDAIKHRGFVAYEREGVQYRDPNIRMNDWKEVMEETKPGPLLKTQSARCMDCGTPFCHQENSGCPLGNKIPEFNELVYHNRWREALERLLETNNFPEFTGRVCPAPCEGSCVLGIIENPVSIKSIECAIIDKAFEEGWMVPRPPVRRTGKRVAIVGSGPAGLAAADQLNKMGHAVTVYERADRIGGLMMYGVPNMKTDKVDIVQRRVNLMTEEGINFVANANVGHDPLYSLDGLREENDAIVLAVGATKPRDLPVPGRELSGVHFAMEFLHANTKSLLDSNLQDGDYISAKGKKVVVIGGGDTGTDCIGTSIRHGCSSIINLELLPEPPQTRALGNPWPQWPRIFRVDYGHQEAASKFGKDPRSYEVLTKRFVGDENGIVKGLEVVRVRWEKDQTGKFQFKEIEGTGEIIEADLVLLAMGFLGPESTIAEKLGVERDNRSNFKADYGRFSTSVKGVFAAGDCRRGQSLVVWAISEGRQAAAQVDKYLIEQNRDQNAAGSEGEPVKRQQDLNKRHQDSSKHTVMT* 2205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1452 2204 CDD GltS 110 526 - -
Dod08g1452 2204 CDD GltS_FMN 936 1315 IPR002932 GO:0006537|GO:0015930|GO:0016638
Dod08g1452 2204 SUPERFAMILY Alpha subunit of glutamate synthase, C-terminal domain 1355 1619 IPR036485 GO:0016491
Dod08g1452 2204 Pfam Conserved region in glutamate synthase 934 1302 IPR002932 GO:0006537|GO:0015930|GO:0016638
Dod08g1452 2204 SUPERFAMILY FMN-linked oxidoreductases 573 1337 - -
Dod08g1452 2204 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 110 537 IPR029055 -
Dod08g1452 2204 MobiDBLite consensus disorder prediction 2185 2204 - -
Dod08g1452 2204 Pfam Glutamate synthase central domain 579 867 IPR006982 GO:0006807|GO:0015930
Dod08g1452 2204 Gene3D Aldolase class I 919 1358 IPR013785 -
Dod08g1452 2204 SUPERFAMILY FAD/NAD(P)-binding domain 1827 2167 IPR036188 -
Dod08g1452 2204 Gene3D - 1939 2100 IPR036188 -
Dod08g1452 2204 PRINTS Adrenodoxin reductase family signature 1831 1853 - -
Dod08g1452 2204 PRINTS Adrenodoxin reductase family signature 1854 1867 - -
Dod08g1452 2204 PRINTS Adrenodoxin reductase family signature 1897 1907 - -
Dod08g1452 2204 PRINTS Adrenodoxin reductase family signature 1975 1989 - -
Dod08g1452 2204 SUPERFAMILY alpha-helical ferredoxin 1683 1840 - -
Dod08g1452 2204 Pfam GXGXG motif 1386 1572 IPR002489 GO:0016491
Dod08g1452 2204 MobiDBLite consensus disorder prediction 2173 2204 - -
Dod08g1452 2204 Gene3D Aldolase class I 559 918 IPR013785 -
Dod08g1452 2204 PIRSF GOGAT 37 2196 IPR012220 GO:0005506|GO:0006537|GO:0010181|GO:0016040|GO:0050660
Dod08g1452 2204 MobiDBLite consensus disorder prediction 1026 1048 - -
Dod08g1452 2204 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 110 546 IPR029055 -
Dod08g1452 2204 PANTHER FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE 88 2173 - -
Dod08g1452 2204 Gene3D - 1677 1828 IPR009051 GO:0051536
Dod08g1452 2204 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 110 511 IPR017932 -
Dod08g1452 2204 CDD gltB_C 1363 1612 IPR002489 GO:0016491
Dod08g1452 2204 Pfam Pyridine nucleotide-disulphide oxidoreductase 1830 2156 IPR023753 GO:0016491
Dod08g1452 2204 Gene3D - 1359 1630 IPR036485 GO:0016491
Dod08g1452 2204 Pfam Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 1706 1817 IPR028261 -
Dod08g1452 2204 Gene3D - 1829 1938 - -
Dod08g1452 2204 Coils Coil 1621 1641 - -
Dod08g1452 2204 Pfam Glutamine amidotransferases class-II 110 534 IPR017932 -
Dod08g1452 2204 TIGRFAM GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 1685 2170 IPR006005 GO:0006537|GO:0016639
Dod08g1452 2204 PANTHER GLUTAMATE SYNTHASE 1 [NADH], CHLOROPLASTIC 88 2173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1452 Dod-Chr8 28697721 28713497 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1452 K00264 - gmx:100784900 3889.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1452 08 28697721 28713497 Dod08g1452 08 28697721 28713497 ECH