Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1427 ATGGTGAAGGAAACAGAGTACTACGATATTCTCGGGGTCACTCCTTCTGCTTCCGAAGACCAAATTCGCAGGGCTTATTATCACAAGGCAGTGCTAGTTCATCCCGATAAAAACCCAAACGATCCTAACTCAGCAGAAAAATTCCAGGTTTTGGGTGAAGCGTACCAAGTTTTGAGCGATCCGGTGCAGAGGAATGCATACGATCAAAATGGAAAACATTCTGTATCCAGAGAAACTATGCTTGACCCCACGGCTGTATTTGCCCTGCTCTTCGGAAGTGAATTGTTTGAGGACTATATAGGGCATCTAGCTGTGGCATCAATGGCTTCTTCCGAACTAGCTGAAGAAAGTGATGATCCTGATAAAATGCATGAAAGGCTAAAGGCTGTTCAAAAAGAAAGGGAAGAAAAACTAGCAAGATTTTTGAAAGATTTTCTTGGCCAATACGTGCGTGGTGACCCAAAAGGATTCTCACAGTGTGCAGAATCCGAAGCAAGACGGCTCTCTAATGCTGCTTTTGGAGTCGATATGTTACATACCATTGGCTATATATACTCAAGACAGGCGGCACAAGAACTGGGAAAAAAGGCCATTTATCTTGGAGTGCCATTTTTGGCTGAGTGGGTTCGCAATAAAGGACACTTCTGGAAATCACAGTTCACTGCTGCTAAAGGTGCTTATCAGTTACTTCAGCTTCAAGAAGACATCCGCAAGCAATTTAAAATGGATGGTAGTGGCCCCGAAACTGATGTTGACTCTCATGTTCGCCTTAATAAGGATACATTGATGAATTCTTTGTGGAAGTTAAATGTAGTTGACATAGAAGTAACCCTTGTCCATGTGTGTCAAATGGTGCTAAGGGAACATAACGTTAAGAAAGAGGAACTTAAAGTTCGGGCAAATGCTCTTAAAATTCTTGGGAAGATATTTCAGGAAAAGAATCCAAAAGGAGGAGAAACATTGAAGAAGAAAATTGCTGCAGATTCTGACTATGAAGGAAGCAGTTCTGATTCTTCAGACGTTGAATCACCTAGAGCACTTTCCTATCGAACTCCCTTTTTCACTCAGGGTCTTGGTAGGCTGTTCAAATGCCTTTGCAATCCAGCATTTGATGTGGACGATGAAGAGATAGTTTACAAATGCAAGTGA 1149 0.4204 MVKETEYYDILGVTPSASEDQIRRAYYHKAVLVHPDKNPNDPNSAEKFQVLGEAYQVLSDPVQRNAYDQNGKHSVSRETMLDPTAVFALLFGSELFEDYIGHLAVASMASSELAEESDDPDKMHERLKAVQKEREEKLARFLKDFLGQYVRGDPKGFSQCAESEARRLSNAAFGVDMLHTIGYIYSRQAAQELGKKAIYLGVPFLAEWVRNKGHFWKSQFTAAKGAYQLLQLQEDIRKQFKMDGSGPETDVDSHVRLNKDTLMNSLWKLNVVDIEVTLVHVCQMVLREHNVKKEELKVRANALKILGKIFQEKNPKGGETLKKKIAADSDYEGSSSDSSDVESPRALSYRTPFFTQGLGRLFKCLCNPAFDVDDEEIVYKCK* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1427 382 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 366 - -
Dod08g1427 382 SUPERFAMILY Chaperone J-domain 2 101 IPR036869 -
Dod08g1427 382 Gene3D DnaJ domain 1 86 IPR036869 -
Dod08g1427 382 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 366 - -
Dod08g1427 382 CDD DnaJ 6 60 IPR001623 -
Dod08g1427 382 PRINTS DnaJ domain signature 63 82 IPR001623 -
Dod08g1427 382 PRINTS DnaJ domain signature 8 26 IPR001623 -
Dod08g1427 382 PRINTS DnaJ domain signature 26 41 IPR001623 -
Dod08g1427 382 PRINTS DnaJ domain signature 43 63 IPR001623 -
Dod08g1427 382 Pfam DnaJ domain 6 68 IPR001623 -
Dod08g1427 382 Pfam X-domain of DnaJ-containing 131 320 IPR026894 -
Dod08g1427 382 ProSitePatterns Nt-dnaJ domain signature. 48 67 IPR018253 -
Dod08g1427 382 SMART dnaj_3 5 63 IPR001623 -
Dod08g1427 382 Coils Coil 286 306 - -
Dod08g1427 382 ProSiteProfiles dnaJ domain profile. 6 71 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1427 Dod-Chr8 26403783 26431405 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1427 7 81 Miscellaneous Gene Families AT1G16680 40.260 6.27e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1427 - - gmx:100793811 652.514