Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1394 ATGGGTGTGAAAAGCTGGGGAATAATAGAATTGCACACGGTCTTGCTCTTTCTGTTATTTTCTTCCATTTTCCCACTCGTTTTCTCAGCGGCCAATCAACCCCGCAACTCCAAGAAACCCAAGACCCAGGCTTCTGATCATCGCCTTGGCTCCTCAGCTGTTTTCCAGGTTCAAGGGAATGTGTACCCTCTTGGGCATTACACAGTGTCCCTCAACATTGGCTATCCCCCAAAGCTTTACGACTTTGACATTGACTCTGGTAGTGACCTCACTTGGGTTCAGTGTGATGCACCATGTAAAGGTTGCACCAAGCCACGCGATCAACTTTATAAACCCAACAACAACCTTGTGGAGTGTGTGGACCAGCTGTGTGCTGGAATCCACTTATCAAAAGAATATCAGTGTGCTGCACCAGATGACCAATGTGACTATGAGGTTGAGTATGCAGACCATGGATCATCTCTGGGCGTGTTAGTCCGAGATCACATTACCTTTCGATTCACTAATGGCTCTGTGGTACGCCCAAGGATAGCCTTTGGGTGTGGATATGATCAGAAGTATTCTGGTCCAAACTCCCCACCTTCTACATCAGGAGTCCTTGGCCTTGGCAGGGGTAAGGCAAGCTTTCTGACCCAACTTCATTCTCTGGGTTTGACTCGCAACGTTGCGGGTCACTGCTTAAGTGTCCAAGGAGGAGGGTTTCTATTCTTTGGAGACGATCTCATCCCTTCTTCTGGAGTTGCTTGGACACCCATGTTGGCTAGTTCCTTGGAAAAACACTACACCGCAGGACCCACTGAATTGCTTTTCAATGGAAAGCCCACTGCTGTTAAGGATCTTGAAGTTATCTTTGATAGCGGGAGCTCATACACATATTTCAATTCCAAAGCTTATCAAGCCGTTGTTGATCAGGTAACTAATGATTTAAAGGGAAAGCAGTTGAAAAGAGCTACCGAGGATCCATCACTTCCAATTTGTTGGAAGGGTGCAAAGTCTTTCAAATCTCTAAGTGATGTCAAGAACTATTTTAAGCCCCTAGCATTGAGGTTCACAAAATCGAAGAATGGGCAGTTGCAACTACCACCAGAAGCTTATCTTATTGTTACTAAACATGGCAACGTATGCTTGGGGATTCTAGATGGCACTGAAGTGGGACTTGAAAATCTTAACTTAATTGGAGACATCTCATTACGAGATAAGATAGTGATTTACGACAACGAGAAACAGCAGATTGGATGGGTTTCTGCCAATTGTGATAGGCTTCGCAATGCCGATCGTGAATTTGAAGAAGGTTCACCTCACCTGTACTCAGCGAATTTGGGTATCTTTGCAGGACCGGTGCCCTGCTACTTATGA 1356 0.455 MGVKSWGIIELHTVLLFLLFSSIFPLVFSAANQPRNSKKPKTQASDHRLGSSAVFQVQGNVYPLGHYTVSLNIGYPPKLYDFDIDSGSDLTWVQCDAPCKGCTKPRDQLYKPNNNLVECVDQLCAGIHLSKEYQCAAPDDQCDYEVEYADHGSSLGVLVRDHITFRFTNGSVVRPRIAFGCGYDQKYSGPNSPPSTSGVLGLGRGKASFLTQLHSLGLTRNVAGHCLSVQGGGFLFFGDDLIPSSGVAWTPMLASSLEKHYTAGPTELLFNGKPTAVKDLEVIFDSGSSYTYFNSKAYQAVVDQVTNDLKGKQLKRATEDPSLPICWKGAKSFKSLSDVKNYFKPLALRFTKSKNGQLQLPPEAYLIVTKHGNVCLGILDGTEVGLENLNLIGDISLRDKIVIYDNEKQQIGWVSANCDRLRNADREFEEGSPHLYSANLGIFAGPVPCYL* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1394 451 Pfam Xylanase inhibitor C-terminal 278 413 IPR032799 -
Dod08g1394 451 ProSiteProfiles Peptidase family A1 domain profile. 67 414 IPR033121 -
Dod08g1394 451 Pfam Xylanase inhibitor N-terminal 67 239 IPR032861 -
Dod08g1394 451 PANTHER ASPARTYL PROTEASES 3 421 IPR001461 GO:0004190|GO:0006508
Dod08g1394 451 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 3 421 - -
Dod08g1394 451 SUPERFAMILY Acid proteases 59 422 IPR021109 -
Dod08g1394 451 CDD nucellin_like 65 418 IPR033823 GO:0004190
Dod08g1394 451 PRINTS Pepsin (A1) aspartic protease family signature 73 93 IPR001461 GO:0004190|GO:0006508
Dod08g1394 451 PRINTS Pepsin (A1) aspartic protease family signature 282 293 IPR001461 GO:0004190|GO:0006508
Dod08g1394 451 PRINTS Pepsin (A1) aspartic protease family signature 390 405 IPR001461 GO:0004190|GO:0006508
Dod08g1394 451 Gene3D Acid Proteases 41 239 IPR021109 -
Dod08g1394 451 Gene3D Acid Proteases 240 424 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1394 Dod-Chr8 23268860 23272268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1394 51 421 Miscellaneous Gene Families AT1G44130 61.022 3.71e-173 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1394 - - aprc:113846122 731.095