Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1384 ATGAACGCCATAGCAACTGCTTCTGCTCTCACTCTCCCAATCTCCTGTAAAACATCCAAGCTTGACGCCAAAAAGGGTTTGAAAGGTAGATTCAGTGTTTTTGCTGTATTTGGAGAAGTAGAGAAGAAGAATGCATGGGGTGCACTCTTTAATGTGGAGGATCCAAGATCTAAAGTCCCACATTATAAAGGAAAGTTTTTGGATGTATATCAAGCCCTAGAAGTGGCTAGATATGATATTCAGTACTGTGATTGGCGAGCTCGGCAAGATGTGCTGACCATCATGCTCCTCCATGAAAAGGTGGTAGAAGTTCTTAATCCTCTAGCTCGTGAATACAAATCAATTGGCACCATGAAGAAGGATCTAGCTGAGTTGCAGGAAGAATTAGCACAAGCTCACAGACAGGTCCATATATCTGAAGCAAGGGTGTCAGCTGCTTTAGAAAAACTAGCTTTCATGGAAGAATTGGTAAATGACAAGCTATTGCAAGGCAGAAGCACAGCAGAAGTTGCCCAGACATCCTCTCCTCCAAGTACACCTGCTAAATCTTTAGATGCAGAAAGGAACAGGAATCCACGGAAAAGCTTGAATGTATCAGGTCCTGTTCAGTCATACCATCCCCACTTGAAGAATTTCTGGTATCCTGTTGCTTTCTCTAATGACCTAAAGGATGATACCATGATCCCGATAGAATGTTTTGAGGAACCATGGGTTATCTTTAGAGGGAAAGATGGGAAACCTGGATGTGTCCAGAATACCTGTGCACACAGATCATGTCCTCTGCACCTTGGCTCTGTAAATGAGGGTCGTATCCAGTGTCCCTATCATGGCTGGGAATATAGCACTGATGGAAAATGTGAGAAAATGCCATCCACTCGACTGCTACATGTGAAGATAAAGTCTATTCCATGTTTTGAAAAAGAGGGGATGATCTGGATTTGGCCTGGCAATGACCCCCCAACAGCCATGCTTCCTTCTTTACTTCCTCCTTCTGGGTTTGAAGTACATGCCGAGATTGTCATGGAACTTCCAGTTGAACATGGATTACTTTTGGACAACCTTTTGGATCTTGCACATGCCCCTTTTACTCACACTTCAACCTTTGCCAAGGGATGGAGCGTTCCCAGCTTGGTCAAATTTTTGACGCCTGCATCTGGTCTGCAAGGATACTGGGATCCATATCCAATTGATATGGAATTTCGGCCACCTTGCATGGTTCTATCTACCATTGGAATTTCAAAGCCTGGAAAACTCGAGGGACAAAGTGCCAGTCAGTGTGCGACCCACCTGCATCAACTTCACGTCTGCTTACCATCTTCAAAACGAAAAACAAGATTGCTTTACCGAATGTCACTGGATTTTGCTCCTTTGCTAAAGCATATTCCTTTTATTCAATATCTATGGAGGCATTTTGCAGAACAGGTTTTAAATGAGGATCTGCGGCTAGTCGTAGGCCAGCAAGAGCGGATGAACAATGGTGCAAATGTATGGAATTGGCCAGTATCCTATGACAAGCTTGGGGTTAGGTACAGGCTATGGAGAGATGCCTTGGAGCGAGGAGCTAAGCAACTACCCTTCAGTAGATAG 1587 0.4417 MNAIATASALTLPISCKTSKLDAKKGLKGRFSVFAVFGEVEKKNAWGALFNVEDPRSKVPHYKGKFLDVYQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLAREYKSIGTMKKDLAELQEELAQAHRQVHISEARVSAALEKLAFMEELVNDKLLQGRSTAEVAQTSSPPSTPAKSLDAERNRNPRKSLNVSGPVQSYHPHLKNFWYPVAFSNDLKDDTMIPIECFEEPWVIFRGKDGKPGCVQNTCAHRSCPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTRLLHVKIKSIPCFEKEGMIWIWPGNDPPTAMLPSLLPPSGFEVHAEIVMELPVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQSASQCATHLHQLHVCLPSSKRKTRLLYRMSLDFAPLLKHIPFIQYLWRHFAEQVLNEDLRLVVGQQERMNNGANVWNWPVSYDKLGVRYRLWRDALERGAKQLPFSR* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1384 528 Coils Coil 108 142 - -
Dod08g1384 528 Pfam Pheophorbide a oxygenase 400 495 IPR013626 GO:0010277
Dod08g1384 528 PANTHER CHLOROPHYLLIDE A OXYGENASE, CHLOROPLASTIC-LIKE 69 528 - -
Dod08g1384 528 SUPERFAMILY Bet v1-like 309 520 - -
Dod08g1384 528 MobiDBLite consensus disorder prediction 167 185 - -
Dod08g1384 528 Pfam Vanillate O-demethylase oxygenase C-terminal domain 346 370 IPR044043 GO:0016491
Dod08g1384 528 Gene3D - 335 523 - -
Dod08g1384 528 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 69 528 - -
Dod08g1384 528 MobiDBLite consensus disorder prediction 167 200 - -
Dod08g1384 528 Pfam Rieske [2Fe-2S] domain 213 294 IPR017941 GO:0051537
Dod08g1384 528 Gene3D - 207 329 IPR036922 GO:0051537
Dod08g1384 528 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 213 313 IPR017941 GO:0051537
Dod08g1384 528 CDD Rieske_RO_Alpha_Cao 196 324 - -
Dod08g1384 528 SUPERFAMILY ISP domain 208 318 IPR036922 GO:0051537
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1384 Dod-Chr8 22781783 22786249 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1384 K13600 - gmx:100806298 984.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1384 08 22781783 22786249 Dod08g1384 08 22781783 22786249 ECH