Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1379 ATGATGGATAAGAAGAGATGGTTATGGAAGAGGAAGTCTTCAGAGAAGAGCCCTGGCGAAACAGAAAGTTCAGGGTCTGTGTCGTCTCATTCTGAGAGGTACTCAGATGAACAGGAGGCATCAAAGGAATCTCCTAATGGAAGCAACCAGTCTACTGATATCACCTCGAGATCAGTGGCCTGGGCTGAAGATGTTAACAATTGCTCGTTTGTTAATGCACAATCGCCTGAGGAAGTCAACTCAAAACCTCTGCCTGCTACAGGCATCATAAAGGATGATTCATTAGAGAGAGACAAAACTGGAGAACTTGAAAATATAAAAAATGTAAAGGAAGGGGATCTAAATGATGGGTTGAGGAATATGTCAGAGAAGCTATCTGCAGCACTTGTGAATGTCAGTGCCAAAGAAGACTTGGTAAAGCAGCATGCCAAAGTTGCTGAAGAAGCCATTGCAGGCTGGGAAAAGGCTGAAAGTGAAGTGGCAATTTCGAAGAAGCAACTTGAAGCAGTCTCTCACAAGAATTCAGCTTTGGAAGATCGAGTCACCCATCTAGATGGCGCACTTAAGGAGTGTGTTAGGCAGCTAAGACAGACAAGGGAAGAGCAGGAAGAGAATATCCAGGATGCAGTACTGAAGAGAACTCATGACTTGGAATCAGTAAAAAATAAACTTGAGAGCAAAGTTGCTGATCTCCAGAGCAAATTAGACGCTTCTATTGCCAAGTCTTCTGTTGATCTTGACTTGTATCACAAGGTTGAGTTTTTGGAGAAAGAGAACATGACTCTCAGGCATGAGCTTTTAGCTCAATCAGAAGAGCTTGAAATTAGGACAATTGAGAGGGATTTAAGTACTCAAGCTGCTGAGACAGCCAGCAAGCAACAGTTAGAAAGCATCAAGAAAGTAGCCAAGCTTGAGGCTGAGTGCCGCAGACTGAGGAGCATGGCTTCAAAAGCTTCCTTAATTAATGATCATAAATCCAATGTTTCATCCTCATTTTGTGTTGAATCTCTCACCGATAGTCAATCAGACAGCGGGGAGCGACTCAATGCAGTAGAACTCGAGACCCAGAAGACGAGTGGCTCAGAGCTGAACAAGTGTGAGCCAAGTTGTTCTGACTCATGGGCTTCCGCACTGATTGCTGAGCTTGATCAGTTCAAGAATGAAAAGTGCAGACAAACTCCATCCAGTTCTATTAAAATTGATCTCATGGATGATTTTCTTGAAATGGAACAGCTTGCTGCGATGTCAGAGACGAAGAACGAAACCCTCGTCCGGGAGTCAGTTGTTGCAGATCAATGCATTAATGAAGAAAGCTCTCTCAGAGCACAATTTGAGATAATGAATCAGCAAATGGATGAACTAAAAGGGAAGTTAGAGAAGGTTGAATCAGAAAAGGCTGAACTAGAGATAGCCTTGATGAAAAGTGAAGAATCTATTGAGGAGTCACAACTTCAGTTGAGGGAGGCAGAAAAGAAATTGGAGGAGCTGCAAAAGGAACTAGAAAATGCTTACAAATCAAAACAATTGGTAGAAAACCACCTAATCAGCATGGAGGCGGAGGCTCAAACGTTGTTTGCAAAGGTTGACATATTAGAAGCAGAGGTTGATAAGGAGAGGGCGGTGTCGGATGAAATTGCAAATAAGTGTAAGGACTTAGAGGAAGAGCTAAAGAGCAAATCTGCAAAGGTTGACTTGTTAGAAGCAGAGGTTGATAAGGAAAGGGCGGTGTTGGATGAAATTGCAAATAAGTGTAAGGACTTAGAGGGTGATAAGGAGAGGGCGGTAGGGGGCGTGTCGGATGAAATTGCAAATAAGTGTAAGGACTTAGAGGAAGAGCTAAAGAGCAAATCTGCAAAGGTTGACTTGTTAGAAGCAGAGGTTGATAAGGAGAGGGCGGTGTTGGATGAAATTGCAAATAAGTTTAAGGACTTAGAGGAAGAGCTAAAGAGCAAATCTGCAAAGGTTGAATTGTTAGAAGCAGAGGTTGATAAGGAGAGGGCGGTGTCGGATGAAATTGCAAATAAGTTTAAGGACTTGGAGGAAGAGCTAAAGGGCAAATCTGCAAAGGTTGACTTGTTAGAAGCAGAGGTTGACAAGGAGAGCGCTATGTTAGAAGAAATAGTAATGAAGTGTAAGGAATTGGAGGAAGAGCTAGAAGAAAGCAAGAAACAGGAAGAGATACTCAGGTCAACAAACAGTTCACATGGAGAAAAGAAGATTAAGCAGGAGGACCTAGCATTGGCAGCCGGAAAGCTTGCGGAGTGCCAGAAAACAATAGCATCCCTGGGGAATCAGTTAAAGTCCCTGGCTACACTAGAGGACTTCTTTATTGACACTGCTAGCATTCCTCCAAGTCCATCAATTGTTGCGCGAGCCAGTGGAGAGATGTGGAAGTTGCATTCAAATGACACATTCTCGCCCAAAAGAGATCCCAATTCTTCGAGGTTGGCTGATGGGAGCTCTTCACCATACCCTAACAAAAATGACGGAAGGTCACCGCCTTCGTCGTCTACATCAACTTCATCGGCGGCCCTGCCGAGCCATGCCGGTTCTGAGAAGACTCGAAATGGCTTTGCAAAATTTTTCTCTCGGACAAAGAGTGGGATCAGACTCGAAATTTAA 2622 0.4363 MMDKKRWLWKRKSSEKSPGETESSGSVSSHSERYSDEQEASKESPNGSNQSTDITSRSVAWAEDVNNCSFVNAQSPEEVNSKPLPATGIIKDDSLERDKTGELENIKNVKEGDLNDGLRNMSEKLSAALVNVSAKEDLVKQHAKVAEEAIAGWEKAESEVAISKKQLEAVSHKNSALEDRVTHLDGALKECVRQLRQTREEQEENIQDAVLKRTHDLESVKNKLESKVADLQSKLDASIAKSSVDLDLYHKVEFLEKENMTLRHELLAQSEELEIRTIERDLSTQAAETASKQQLESIKKVAKLEAECRRLRSMASKASLINDHKSNVSSSFCVESLTDSQSDSGERLNAVELETQKTSGSELNKCEPSCSDSWASALIAELDQFKNEKCRQTPSSSIKIDLMDDFLEMEQLAAMSETKNETLVRESVVADQCINEESSLRAQFEIMNQQMDELKGKLEKVESEKAELEIALMKSEESIEESQLQLREAEKKLEELQKELENAYKSKQLVENHLISMEAEAQTLFAKVDILEAEVDKERAVSDEIANKCKDLEEELKSKSAKVDLLEAEVDKERAVLDEIANKCKDLEGDKERAVGGVSDEIANKCKDLEEELKSKSAKVDLLEAEVDKERAVLDEIANKFKDLEEELKSKSAKVELLEAEVDKERAVSDEIANKFKDLEEELKGKSAKVDLLEAEVDKESAMLEEIVMKCKELEEELEESKKQEEILRSTNSSHGEKKIKQEDLALAAGKLAECQKTIASLGNQLKSLATLEDFFIDTASIPPSPSIVARASGEMWKLHSNDTFSPKRDPNSSRLADGSSSPYPNKNDGRSPPSSSTSTSSAALPSHAGSEKTRNGFAKFFSRTKSGIRLEI* 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1379 873 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 555 591 - -
Dod08g1379 873 Pfam Filament-like plant protein, long coiled-coil 135 240 IPR008587 -
Dod08g1379 873 Pfam Filament-like plant protein, long coiled-coil 248 317 IPR008587 -
Dod08g1379 873 Pfam Filament-like plant protein, long coiled-coil 345 426 IPR008587 -
Dod08g1379 873 Pfam Filament-like plant protein, long coiled-coil 609 771 IPR008587 -
Dod08g1379 873 PANTHER FILAMENT-LIKE PLANT PROTEIN 1-RELATED 505 558 - -
Dod08g1379 873 MobiDBLite consensus disorder prediction 719 740 - -
Dod08g1379 873 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 647 684 - -
Dod08g1379 873 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 682 872 - -
Dod08g1379 873 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 2 509 - -
Dod08g1379 873 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 595 651 - -
Dod08g1379 873 PANTHER FILAMENT-LIKE PLANT PROTEIN 1-RELATED 682 872 - -
Dod08g1379 873 PANTHER FILAMENT-LIKE PLANT PROTEIN 1-RELATED 595 651 - -
Dod08g1379 873 MobiDBLite consensus disorder prediction 72 96 - -
Dod08g1379 873 Coils Coil 599 731 - -
Dod08g1379 873 Gene3D - 566 724 - -
Dod08g1379 873 Coils Coil 214 241 - -
Dod08g1379 873 MobiDBLite consensus disorder prediction 1 18 - -
Dod08g1379 873 MobiDBLite consensus disorder prediction 41 58 - -
Dod08g1379 873 Coils Coil 252 272 - -
Dod08g1379 873 Coils Coil 192 212 - -
Dod08g1379 873 PANTHER FILAMENT-LIKE PLANT PROTEIN 1-RELATED 647 684 - -
Dod08g1379 873 PANTHER FILAMENT-LIKE PLANT PROTEIN 1-RELATED 555 591 - -
Dod08g1379 873 PANTHER FILAMENT-LIKE PLANT PROTEIN 1-RELATED 2 509 - -
Dod08g1379 873 MobiDBLite consensus disorder prediction 1 58 - -
Dod08g1379 873 MobiDBLite consensus disorder prediction 806 849 - -
Dod08g1379 873 MobiDBLite consensus disorder prediction 800 859 - -
Dod08g1379 873 SUPERFAMILY Tropomyosin 605 771 - -
Dod08g1379 873 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 505 558 - -
Dod08g1379 873 SUPERFAMILY Tropomyosin 438 661 - -
Dod08g1379 873 Coils Coil 444 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1379 Dod-Chr8 22519930 22524366 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1379 - - aprc:113847186 1127.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1379 08 22519930 22524366 Dod08g1379 08 22519930 22524366 ECH