Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1378 ATGGCTCAAACCATGATGCTCATGTCTAGTGTCACTGTTAGCCATTCCTGTGATTTGAAGAGAGACTCTTTGCTCCAACTAAAGAGTCGAAGAAGGCCTAAGTTCTCTCATCTCCCGTTCAACCCACTTCCTTCAACAACTTTTTCTTTTTCTTCTTCTCGAACACTCACAACGCTTGCAATCTTCAAATCAAAGACCAAGGCCGCCCCTACTCCTAGCAAGGTTGTGAAGTCCAAGCCACAGCCAAAGATTGAAGATGGCATTTTTGGGACTTCTGGAGGTTTTGGTTTTACTAAGCAGAATGAGCTCTTTGTTGGTCGCGTTGCCATGCTTGGTTTTGCTGCATCATTGTTGGGTGAAGCAATTACTGGGAAGGGAATCTTGGCACAACTGAATCTGGAAACTGGAATTCCCATTTATGAAGCCGAGCCTCTTCTCCTTTTCTTCATCCTTTTCACTCTACTTGGAGCCATTGGAGCTCTAGGTGACCGTGGTAGATTTGTCGATGACCCTCCCACCGGACTGGATAAGGCAGTCATTCCTCCTGGCAAAGGAGTCAGATCTGCTCTGGGTCTCCGTGAAGGAGGTCCTTTATTTGGATTTACGAAAGCAAACGAGCTCTTTGTTGGTCGGTTGGCTCAATTGGGTTTTGCTTTCTCTTTAATTGGCGAAATTATCACAGGAAAAGGTGCTCTAGCTCAGCTGAACATTGAGACTGGGGTGCCCATCAATGAAATCGAGCCCCTAGTGTTGTTCAGCATTGTGTTCTTCTTCTTTGCTGCTTTGAATCCTGGAACTGGTAAATTTGTTACGGACGGGCAGGATGAATAG 831 0.4585 MAQTMMLMSSVTVSHSCDLKRDSLLQLKSRRRPKFSHLPFNPLPSTTFSFSSSRTLTTLAIFKSKTKAAPTPSKVVKSKPQPKIEDGIFGTSGGFGFTKQNELFVGRVAMLGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDDPPTGLDKAVIPPGKGVRSALGLREGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLFSIVFFFFAALNPGTGKFVTDGQDE* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1378 276 Gene3D Chlorophyll a/b binding protein domain 81 140 - -
Dod08g1378 276 Gene3D Chlorophyll a/b binding protein domain 141 247 - -
Dod08g1378 276 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 1 188 - -
Dod08g1378 276 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 199 262 - -
Dod08g1378 276 Pfam Chlorophyll A-B binding protein 93 221 IPR022796 -
Dod08g1378 276 PANTHER PHOTOSYSTEM II 22 KDA PROTEIN, CHLOROPLASTIC 1 188 - -
Dod08g1378 276 PANTHER PHOTOSYSTEM II 22 KDA PROTEIN, CHLOROPLASTIC 199 262 - -
Dod08g1378 276 SUPERFAMILY Chlorophyll a-b binding protein 85 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1378 Dod-Chr8 22293279 22297733 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1378 K03542 - rcu:8274074 395.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1378 08 22293279 22297733 Dod08g1378 08 22293279 22297733 ECH