Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1323 ATGCCCACTCTTCACGGCGCCCCCGCCGCCAGATCCGACCCGGTTACCCGACCCGCCAACAACAGCCACAGTCACGGGGACATCATCAGTCACTGCGTCGCTAACGGCGGCGACTCGGGCCGCGCGATTCCTCCGCCGGCGGCTGCGGCGGCTCTGGAGGTGAAAATCAAGGACCTTGTCGGGAGCGGAATCTCGGGGATACTGCACAAGTGGGTGAACTACGGGAAAGGATGGAGGCCTCGTTGGTTCGTGCTCCAAGACGGTGTGCTCTCCTATTACAAAGTTCATGGCCCCGACAGGATCATCGTCAACTCCGAAACCGAGAAGGGTTCCAGGATCATCGGCGAGGAATCGGTGAGGAGGATCGCTCGCAACCGCGATTCTCATCACTCTCATTCTCATCATCAGCCTCATCAGCACTATCGGAGAAAGCCATTCGGCGAAATCCATCTCAAGGTTTCAACTATTCGTGAGAGCAGATCAGATGACAAGCGCTTTTCAATTTTCACTGGTACGAAGAGACTCCACTTGAGGGCTGAGACTCATGACGATCGAGTGGCATGGGTGGAGGCCTTGCAGGCTGTGAAAGATATGTTCCCTCGGATGTCCAACAGCGAGCTTATGTCTCCAGCTGACTGTGTTTCCATTTCTACTGAGAAGCTGAGGCATAGACTTCTGGAAGAAGGTGCAAGTGAGGCAGCCATTCAGGATAGTGAGCAAATCATGAGAAATGAATTCGCTTCGCTGCAAAACCAGCTTATGCTGCTTAAGCAGAAGCAGTTGACCCTAGTTGATGCTTTGCGGCATTTAGAGACCGAAAAGGTTGATCTGGAGAACACCGTTGTTGATGAGAGCCAAAGACAGTTGAATGACCATGAGGCTGCCTCCAGAAGGCTGGAAAAATCTAGTGCAAGTGCAAGTGAGTCTGAGGATGATCATGAAAGAAATGATGCAGCAGAGGAAGAAACAGATGATGATGACAATGCCTTTTTTGATACTCGTGATTTTCTATCATCTAGTTCTTTTAAAAGTAATGGATCGGATTATAGGGTATCATCTTTCTCCTCAGATGACGGGAGCTGTTCTGTTGATTCGGAGGAGGTTTTAGATCTTTCTATTAGATCTGTTGGTGCAAGCTATCCTCATGTTAGGCGACGTAAGAAATTGCCTGACCCTGTTGAAAAAGAGAAAGGTGTCAGTCTTTGGTCAATGATCAAGGATAATATTGGGAAGGATCTAACAAAAGTTTGTCTTCCTGTTTATTTCAATGAGCCTCTCTCCTCCCTGCAAAAATGCTGTGAAGAAATGGAATATTCATATCTCCTGGACCGAGCAGATGAATGGGGTAGAAGGGGTAATAGCCTCATGAGGATTCTCAATGTTGCTGCTTTTGCTGTATCAGGCTATGCTTCAACTGATGGCAGAAATTGCAAACCATTCAATCCATTACTAGGGGAAACATATGAGGCTGACTTTCCAGATAAAGGCTTTCGTTTTTTCTCTGAAAAGGTTAGTCATCACCCTATGATAGTTGCATGTCACTGTGAGGGTACAGGTTGGAAATTTTGGGGGGACACCAACTTAAAGAGCAAATTTTCGGGGCGATCAATTCAGCTTGATCCTGTTGGTATTTTGACTGTGGAATTTGCTGATGGTGAAGTATTCCAATGGAGTAAGGTTACTACATCAATATACAATCTCATATTGGGAAAGCTGTACTGTGATCACTATGGTACAATGCGTGTACAGGGAAACCGAGAATACTCGTGTAAACTGAAATTCAAGGAACAATCAATTATTGATCGAAATCCTCACCAGGTTCATGGTATTGTTCAAGATAGAAATGGGAAAACAGTGTCTACTTTATTTGGAAAATGGGATGAAAGCATGTATTATGTTAATGGAGACTTTGGTGGGAAGGGTAAAGGTTATGACTCTGTGTCAGAAGCCCATCAACTCTGGCAGCGAAGCAAGCCTCCCAAGTTCCCCACTAAATATAATTTCACTCGCTTTGCAATCACATTAAATGAGCTTACCCCTGGATTGAAGGAAAAGCTGCCACCTACAGACTCCAGGTTAAGACCAGACCAAAGGCATCTGGAAAACGGGGAATATGACATGGCAAATTCAGAGAAGTTACGGCTAGAGCAGCGGCAACGGCAGGCTCGGAAGATGCAAGAGAGTGGTTGGAAACCAAGGTGGTTTGCCAGAGATGAAGCAAGCGATACCTACCGCTACATGGGAGGGTACTGGGAAGCCCGAGAGCATGGGAAATGGGACTTCTGTCCTGACATCTTCGGCCAAATTCCTTCCGATCATCTTTCTGACGAAGGTCAAACTGCACTTTAG 2349 0.4679 MPTLHGAPAARSDPVTRPANNSHSHGDIISHCVANGGDSGRAIPPPAAAAALEVKIKDLVGSGISGILHKWVNYGKGWRPRWFVLQDGVLSYYKVHGPDRIIVNSETEKGSRIIGEESVRRIARNRDSHHSHSHHQPHQHYRRKPFGEIHLKVSTIRESRSDDKRFSIFTGTKRLHLRAETHDDRVAWVEALQAVKDMFPRMSNSELMSPADCVSISTEKLRHRLLEEGASEAAIQDSEQIMRNEFASLQNQLMLLKQKQLTLVDALRHLETEKVDLENTVVDESQRQLNDHEAASRRLEKSSASASESEDDHERNDAAEEETDDDDNAFFDTRDFLSSSSFKSNGSDYRVSSFSSDDGSCSVDSEEVLDLSIRSVGASYPHVRRRKKLPDPVEKEKGVSLWSMIKDNIGKDLTKVCLPVYFNEPLSSLQKCCEEMEYSYLLDRADEWGRRGNSLMRILNVAAFAVSGYASTDGRNCKPFNPLLGETYEADFPDKGFRFFSEKVSHHPMIVACHCEGTGWKFWGDTNLKSKFSGRSIQLDPVGILTVEFADGEVFQWSKVTTSIYNLILGKLYCDHYGTMRVQGNREYSCKLKFKEQSIIDRNPHQVHGIVQDRNGKTVSTLFGKWDESMYYVNGDFGGKGKGYDSVSEAHQLWQRSKPPKFPTKYNFTRFAITLNELTPGLKEKLPPTDSRLRPDQRHLENGEYDMANSEKLRLEQRQRQARKMQESGWKPRWFARDEASDTYRYMGGYWEAREHGKWDFCPDIFGQIPSDHLSDEGQTAL* 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1323 782 Gene3D - 697 758 - -
Dod08g1323 782 MobiDBLite consensus disorder prediction 283 330 - -
Dod08g1323 782 Coils Coil 239 259 - -
Dod08g1323 782 Coils Coil 267 302 - -
Dod08g1323 782 CDD PH_ORP_plant 64 204 - -
Dod08g1323 782 Gene3D - 62 199 IPR011993 -
Dod08g1323 782 SUPERFAMILY PH domain-like 64 197 - -
Dod08g1323 782 MobiDBLite consensus disorder prediction 283 313 - -
Dod08g1323 782 MobiDBLite consensus disorder prediction 1 27 - -
Dod08g1323 782 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 1C 23 772 - -
Dod08g1323 782 SMART PH_update 62 199 IPR001849 -
Dod08g1323 782 ProSiteProfiles PH domain profile. 61 197 IPR001849 -
Dod08g1323 782 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 23 772 IPR000648 GO:0008289
Dod08g1323 782 MobiDBLite consensus disorder prediction 314 329 - -
Dod08g1323 782 Pfam Pleckstrin homology domain 69 193 - -
Dod08g1323 782 Gene3D - 486 658 - -
Dod08g1323 782 SUPERFAMILY Oxysterol-binding protein-like 395 774 IPR037239 -
Dod08g1323 782 Pfam Oxysterol-binding protein 400 755 IPR000648 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1323 Dod-Chr8 19911773 19919739 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1323 K20456 - gmx:100817212 1224.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1323 08 19911773 19919739 Dod08g1323 08 19911773 19919739 ECH