Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1287 ATGATGGCGAGCTGTATCCACCTCAAAACATGGCTTATTAATTTGGTCATCTTGTCTACTTCTTTTTTGTCTCATGGAGGAAGAACGAATCTCGACTCCCAAATAAGAGCAGTTAATTTGGGAGGCTGGCTAGTTGCTGAAGGTTGGATCAAACCTTCTCTCTTTGATGGCATTCCAAATAAGGACTTCTTGGATGGAACTGGTCTTCAGTTCAAGTCTGTGACAACAACGAAGTATCTGTGTGCGGAGAGTGGAGGAGGAACAATCCTAGCTGCAAACCGCACAACTGCTTCGGGTTGGGAAACTTTTAGTTTATGGAGGATAAATGAGAACACTTTCAGATTCAGGGTTTTCAACAAGCAGTTTGTTGGTTTAGATGGGATCAACGTGGTTGCTATTACTAATAATCCTACTGATTCTGAGACGTTTAACATTGTTAAGGAAAGTGGCAATTCAAGCCGTGTTCGAATAAAAGCATCCAATGGATACTACTTGCAGGCAAAAACAGATGTGCTAGTGACAGCTGATGTTTCGGAGGTTAGTGGATGGGAGGATGATGATCCAAGTGTTTTTGAATTGAAAATTGCCAAAAGAATGCAAGGCGAATTCCAAGTCACAAATGGTTATGGACCAATCAATGCTCCAAAAGTTATGCAGAAACACTGGAGCACTTTTATTGTTGAAGATGATTTTAAGTTCATAGCCACCAATGGATTAAATGCGGTTAGAATTCCCGTTGGCTGGTGGATAGCAAGTGATCCAACTCCACCAGCACCTTATGTTGGGGGTTCCTTGCATGCACTAGACAATGCCTTCTTATGGGCAGAGAAATATGGATTGAAAATCATCATTGATCTTCACGCTGCACCTGGTTCTCAAAATGGCTATGAGCATAGCTCTTCAAGAGATGGTTCTCAAGAATGGGGACAAACGAATGAAAATATCCAAGAAACAGTTAGTGTTATAGACTTCCTAACCGCAAGGTATGCAAAATGCCTAAGCCTTTATGCAGTTGAGCTCATAAACGAGCCTCTTTCACCTGGTGTGACATTAGAGAGTTTGACCACGTACTACAAGGCTGGTTATGAAGCTATACGGAAGCACTCCAACAATGCTTTTGTGGTGTTGTCAAATAGGATAGGAGCCTCAGAGCCTAGGGAACTCTTCCCTACAGCCAATGGCCTTGTGCGATCCGTGATTGATTACCACTATTACAACCTCTTTGAATCTAAATTTGATGGCTTGAATGTCCAACAGAACATTGATTTCATCCAAACCAATCGCTCATCTCAGTTGACCTATGTTACAACCTCGAATGGACCTCTTACTTTTGTCGGTGAATGGGTTGCCGAGTGGCAAGTTAAAGGGGCTACAAAGGAGGACTACCAAAGATTCGCGAAGGCCCAAACAGATGTTTATGGAAGAGCGACTTTTGGATGGGCTTACTGGACCTTAAAGAATGTTAACAACCACTGGAGTCTCGAGTGGATGATTAAGAATGGTTATATCATGCTTTTACCAAGAAAGGAAAACGAAGCTTAA 1542 0.4222 MMASCIHLKTWLINLVILSTSFLSHGGRTNLDSQIRAVNLGGWLVAEGWIKPSLFDGIPNKDFLDGTGLQFKSVTTTKYLCAESGGGTILAANRTTASGWETFSLWRINENTFRFRVFNKQFVGLDGINVVAITNNPTDSETFNIVKESGNSSRVRIKASNGYYLQAKTDVLVTADVSEVSGWEDDDPSVFELKIAKRMQGEFQVTNGYGPINAPKVMQKHWSTFIVEDDFKFIATNGLNAVRIPVGWWIASDPTPPAPYVGGSLHALDNAFLWAEKYGLKIIIDLHAAPGSQNGYEHSSSRDGSQEWGQTNENIQETVSVIDFLTARYAKCLSLYAVELINEPLSPGVTLESLTTYYKAGYEAIRKHSNNAFVVLSNRIGASEPRELFPTANGLVRSVIDYHYYNLFESKFDGLNVQQNIDFIQTNRSSQLTYVTTSNGPLTFVGEWVAEWQVKGATKEDYQRFAKAQTDVYGRATFGWAYWTLKNVNNHWSLEWMIKNGYIMLLPRKENEA* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1287 513 Pfam Cellulase (glycosyl hydrolase family 5) 218 487 IPR001547 GO:0004553|GO:0071704
Dod08g1287 513 PANTHER FASCIN 8 504 IPR010431 GO:0007015|GO:0051015
Dod08g1287 513 PANTHER PUTATIVE-RELATED 8 504 - -
Dod08g1287 513 SUPERFAMILY (Trans)glycosidases 34 503 IPR017853 -
Dod08g1287 513 Gene3D - 47 185 - -
Dod08g1287 513 Gene3D Glycosidases 186 512 - -
Dod08g1287 513 SUPERFAMILY Actin-crosslinking proteins 69 184 IPR008999 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1287 Dod-Chr8 18630460 18634283 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1287 - - gmx:100790619 853.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1287 08 18630460 18634283 Dod08g1287 08 18630460 18634283 ECH