Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1284 ATGAGCGTGGATTTGAAGAAAGCTTCCTCTAATGGGCATGAGAAAATGCTAAGTCGACAAGAACAGCAAGCACAGATCAACGAGGTGAGAAGGTTGATAGGGCCATTGTCTGGTAAGGCATCTATATATTGTTCTGATGCCTGCATCTCAAGGTATTTAAGGGCACGGAATTGGAATGTCAAGAAGGCAGCTAAGATGTTGAAAGAGACCCTAAAATGGAGACAACAATACAAACCAGAAGAGATCCGCTGGGACGATGTTGCTCAGGAAGCAGAGACAGGGAAGATCTATAGGTCAAATTATGCCGACAAGCATGGGAGAACAGTCCTTGTAATTAGACCTAGTCGCCAGAACTCAAAGTCCACAAAAGGGCAGATTAAGTATTTGGTATACTGCATGGAGAATGCTATTTTAAATCTTCCACCAGAACAGGAGCAAATGGTCTGGCTGATTGACTTCCATGGTTTCAATTTGTCAAATGTAACAGTCAAGGCTACACGTGAAACTACCCATGTATTACAAGACCATTACCCTGAGCGGCTAGGTTTGGCAATACTGTACAATCCACCCAAGTTCTTTGAACCATTCTTCACGATGGTAAAGCCCCTATTAGAGCCTAAAACTTATAATAAATTGAAGTTCGTTTACTCTGATGATAACAACACCAAGAAGATTATGGAGGATTTATTTGATTTGGACCTCCTTGAATCTGCATTTGGTGGGAATGATGACACAGGATTTGACATCAACAAATATTCTGAGAGAATGAAAGAGGATGACAAGAAGATTCCTTCTTTCTGGACAAGGGAAAACTCACCGTCATCAGTCCCAATCGTCACTTCTTCTTTAGATTCGATTAGGTTAGACTCAGATTCTGATCATTCTGACAATGAGAAGACAGGCAATTCCCCTGACCCCGGGATGGATACTGGGATCATTAACCCTGACCAGAGTATCTTGGTTAACCGAGGGGATGGAAATGCCAAAGCGGATGTCAACATTGAAATGACAAATTAG 1017 0.4199 MSVDLKKASSNGHEKMLSRQEQQAQINEVRRLIGPLSGKASIYCSDACISRYLRARNWNVKKAAKMLKETLKWRQQYKPEEIRWDDVAQEAETGKIYRSNYADKHGRTVLVIRPSRQNSKSTKGQIKYLVYCMENAILNLPPEQEQMVWLIDFHGFNLSNVTVKATRETTHVLQDHYPERLGLAILYNPPKFFEPFFTMVKPLLEPKTYNKLKFVYSDDNNTKKIMEDLFDLDLLESAFGGNDDTGFDINKYSERMKEDDKKIPSFWTRENSPSSVPIVTSSLDSIRLDSDSDHSDNEKTGNSPDPGMDTGIINPDQSILVNRGDGNAKADVNIEMTN* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1284 338 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 84 247 IPR001251 -
Dod08g1284 338 PANTHER CRAL-TRIO LIPID BINDING DOMAIN, CRAL/TRIO DOMAIN-CONTAINING PROTEIN-RELATED 1 300 - -
Dod08g1284 338 SMART sec14_4 90 244 IPR001251 -
Dod08g1284 338 MobiDBLite consensus disorder prediction 286 325 - -
Dod08g1284 338 SUPERFAMILY CRAL/TRIO domain 84 262 IPR036865 -
Dod08g1284 338 CDD SEC14 92 242 IPR001251 -
Dod08g1284 338 Gene3D - 3 272 IPR036865 -
Dod08g1284 338 SUPERFAMILY CRAL/TRIO N-terminal domain 20 86 IPR036273 -
Dod08g1284 338 Pfam CRAL/TRIO domain 93 241 IPR001251 -
Dod08g1284 338 MobiDBLite consensus disorder prediction 1 21 - -
Dod08g1284 338 PANTHER GH16843P 1 300 - -
Dod08g1284 338 Pfam CRAL/TRIO, N-terminal domain 45 69 IPR011074 -
Dod08g1284 338 SMART CRAL_TRIO_N_2 45 70 IPR011074 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1284 Dod-Chr8 18581375 18587683 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1284 - - gmx:100780151 556.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1284 08 18581375 18587683 Dod08g1284 08 18581375 18587683 ECH
Dod08g1284 08 18581375 18587683 Dod09g1318 09 34420525 34424451 PCT