Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1281 ATGGATAGCGTAATGAGCAAGCTCCGTAGCCTGGACGCGTACCCTAAAATCAACGAGGATTTCTACAGCCGCACGCTCTCTGGCGGCGTCATCACCCTCGCTTCCTCCGTTCTCATGCTCTTACTCTTCATCTCCGAGCTCCGATTGTATCTGCATGCTGCAACTGAGACCAAGCTTGTTGTGGATACTTCTAGGGGTGAAACGCTGCGTATCAATTTTGATGTAACGTTTCCTGCCCTACCATGCTCGATAATCAGTCTTGACGCCATGGACATTAGTGGGGAGCAACATCTAGATGTAAAACATGATATAATCAAGAAAAGATTAGATTCTCATGGCAATGTAATAGAAACAAGGCAGGACGGAATTGGTGCTCCCAAGATTGAAAAGCCATTGCAAAGACATGGAGGCAGGCTTGAGCACAATGAGACTTATTGTGGTTCTTGTTTTGGTGCGGAAGCGTCAGATGAGGACTGCTGTAATTCCTGTGAGGATGTTCGCGAAGCATATAGAAAAAAAGGGTGGGCGCTTTCAAATCCAGATTTAATTGATCAGTGCAAAAGGGAAGGATTCTTGCAGAGAATCAAGGATGAAGATGGCGAAGGATGCAATGTCTATGGTTTCTTGGAAGTAAATAAGGTGGCAGGGAATTTTCATTTTGCTCCTGGGAAAAGCTTTCAGCAGTCTGGTGTACATGTTCATGACCTGCTGGCTTTTCAAAAGGACTCCTTCAATTTAAGTCACCACATCAACCGATTAGCTTTTGGAGAGTATTTTCCTGGTGTAGTGAATCCTCTTGATGGCGTGCATTGGACTCAACAAGCACCAAGTGGGATGTATCAGTATTTCATTAAGGTTGTGCCTACTGTTTACACTGATGTGAGCGGGCATACTATCCAGTCAAACCAGTTCTCTGTGACTGAACACTTCAAGACTGGAGATGTGGGTCGTTTTCAGTCCCTGCCTGGAGTTTTCTTCTTCTATGACCTTTCTCCAATTAAGGTTACCTTTACAGAAGAACATGTCTCATTCTTGCACTTCCTTACTAATGTGTGCGCCATAGTTGGAGGTGTTTTCACTGTTTCTGGAATACTAGATTCATTTATCTACCATGGTCAAAGGGCTATCAAGAAGAAGATGGAAATTGGAAAATTGAGCTGA 1161 0.4401 MDSVMSKLRSLDAYPKINEDFYSRTLSGGVITLASSVLMLLLFISELRLYLHAATETKLVVDTSRGETLRINFDVTFPALPCSIISLDAMDISGEQHLDVKHDIIKKRLDSHGNVIETRQDGIGAPKIEKPLQRHGGRLEHNETYCGSCFGAEASDEDCCNSCEDVREAYRKKGWALSNPDLIDQCKREGFLQRIKDEDGEGCNVYGFLEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQKDSFNLSHHINRLAFGEYFPGVVNPLDGVHWTQQAPSGMYQYFIKVVPTVYTDVSGHTIQSNQFSVTEHFKTGDVGRFQSLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQRAIKKKMEIGKLS* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1281 386 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 8 97 IPR039542 -
Dod08g1281 386 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 2 385 IPR045888 -
Dod08g1281 386 PANTHER ENDOPLASMIC RETICULUM VESICLE TRANSPORTER PROTEIN 2 385 - -
Dod08g1281 386 Pfam Endoplasmic reticulum vesicle transporter 149 366 IPR012936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1281 Dod-Chr8 18429383 18439190 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1281 K20367 - gmx:100782309 759.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1281 08 18429383 18439190 Dod08g1281 08 18429383 18439190 ECH