Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1270 ATGGCCGTTGGGGGATTCGCCGTTGACGCCTCAGCCAATGGCTTCGACGGCAAGATTACACTCTCGGTTGTCATCACATGCATCGTTGCTGCATCCAGTGGACTCATTTTTGGCTATGACATCGGAATTTCAGGAGGTGTTACTACGATGAAACCATTTCTTGAAAAATTCTTCCCAGCAATACTGAGAAAGGTTGCTAGCGCCGAAACAAACATGTACTGCGTGTATGACAGTCAGGTATTGACGTTATTCACGTCCTCCCTCTATCTAGCGGGCTTAGTGTCATCGCTCTTGGCTAGCCGAGTCACAACGGCGTTGGGTAGGAGAAACACCATGATATTGGGTGGTTGCATCTTTTTTGCTGGTGGTGCCATCAACGGTGGTGCTCAAAATATTGCAATGCTCATCTTGGGTCGCATCTTGCTCGGCCTTGGAGTCGGTTTCACTAATCAAGCTACACCGGTCTACCTTTCAGAAATTGCTCCACCAAAATGGCGAGGTGCATTTAACACAGGCTTCCAATTCTTCATAGGTCTTGGGGTGGTGGCTGCCAACTGCATCAACTTTGGAACTGCCAAGCACCCATGGGGTTGGCGACTCTCCCTTGGGCTATCCACAATCCCAGCAACTATAATGACAATTGGTGCCTTCCTAATCCCCGACACTCCATGCAGCTTGGTGGAGCGTGGCAAGATAGACCAAGCAAGACAAGCCCTACATAAAGTAAGAGGCCCTACAACTGATGTAGGACCCGAATTGGAAGAAGTGATTAAATGGTCGCAAGTTTCAAAAACCGTGGAGCAACAGAGCTTTGTCACTATATTTGAGAGGCAGTATCTACCTCAGTTGGTGATGGCATTTGCTATCCCATTGTCTCAACAGCTTACAGGGATCAACATAGTTGCATTCTATGCACCTAACCTTTTTCAATCTGTGGGTTTTGGCAATGACACGGCTTTGCTCTCAGCCGTTATACTTGGACTCGTCAATCTTGCTTCTATTCTCGTGTCAACTGCCATTGTTGATCGCTTTGGTCGAAGATTCTTGTTCATTATCGGAGGCATTCAAATGCTTGTCTGCATGGTACTTGAATGTCTTCTGGCGTTCCAAATATATCAAAATTTTGGACTGCAATAA 1137 0.4679 MAVGGFAVDASANGFDGKITLSVVITCIVAASSGLIFGYDIGISGGVTTMKPFLEKFFPAILRKVASAETNMYCVYDSQVLTLFTSSLYLAGLVSSLLASRVTTALGRRNTMILGGCIFFAGGAINGGAQNIAMLILGRILLGLGVGFTNQATPVYLSEIAPPKWRGAFNTGFQFFIGLGVVAANCINFGTAKHPWGWRLSLGLSTIPATIMTIGAFLIPDTPCSLVERGKIDQARQALHKVRGPTTDVGPELEEVIKWSQVSKTVEQQSFVTIFERQYLPQLVMAFAIPLSQQLTGINIVAFYAPNLFQSVGFGNDTALLSAVILGLVNLASILVSTAIVDRFGRRFLFIIGGIQMLVCMVLECLLAFQIYQNFGLQ* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1270 378 ProSiteProfiles Major facilitator superfamily (MFS) profile. 26 378 IPR020846 GO:0022857
Dod08g1270 378 ProSitePatterns Sugar transport proteins signature 2. 141 166 IPR005829 GO:0016021|GO:0022857|GO:0055085
Dod08g1270 378 PRINTS Sugar transporter signature 34 44 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod08g1270 378 PRINTS Sugar transporter signature 293 303 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod08g1270 378 PRINTS Sugar transporter signature 136 155 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod08g1270 378 SUPERFAMILY MFS general substrate transporter 28 363 IPR036259 -
Dod08g1270 378 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 3 363 IPR045262 GO:0015144
Dod08g1270 378 Gene3D MFS general substrate transporter like domains 14 377 IPR036259 -
Dod08g1270 378 TIGRFAM SP: MFS transporter, sugar porter (SP) family 22 363 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod08g1270 378 CDD MFS_STP 29 363 IPR044778 GO:0015145|GO:0015749
Dod08g1270 378 Pfam Sugar (and other) transporter 27 367 IPR005828 GO:0016021|GO:0022857|GO:0055085
Dod08g1270 378 PANTHER SUGAR TRANSPORTER 3 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1270 Dod-Chr8 17961233 18002606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1270 50 362 Organic Solute Cotransporters AT1G34580 62.658 3.06e-136 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1270 K24193 - gmx:100783916 576.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1270 08 17961233 18002606 Dod08g1270 08 17961233 18002606 ECH