Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1258 ATGCAGAAAAATTCAATGTGCAACGTGAGGGTCATGAGTCTTGAGAGCCCTGTGAAGGCTGAAGTAAATGATGCTTATGAAGGGGAAGATGAGAAGGAACACTCACTCTCAATCAAGAGAGAACCCTCTGATTTTGATCTCCAAGGCCATGAATCTGTTGTGAGTGAAGGAGGATATGATCCAACGGATAAAGAGGTGAAGTGTCCCATTCTATATGGAAACCAAGCCAACAATCAATTGGAAGACAAAAATGATAGATTAAGTGAAAAAAGTGTTGATATAATCCAAAGCGGACGTGTCAGTGATCCTGGGATTGGCAAGACTGAGTTCTGGGCTTCTCCAAAGCTCAAGAGGTCCTGCTCTAACCTGGAAAGGAGGGATGTTCTCAGGGAGATGACTCATCACTTGCCTCATTCAAAGTCGCAGTCTTTTAAGGATTTGCAGGAAGTATTAGCAAATCAGGTGGGTAATCTTGAAAGCCCCAGGTCTGTAATGAGTCACTGCAGTGCTGATAGAGTGCTGTTGAAAAGGCACTCAGCAAGCCAAGTTCTTCCTTCTGGAAGTAAGAAATTGTGGTGGAAATTGTTCCTCTGGAGCCACAGGAACATACATAAAACTTTCTCAAGCAAATCAACACAAGCTGTTCCTGATAGTGCTGCTTTGAATAGTCAATGTGGTTACCATTCAGACACCCTTGAACCAAAACACGGAAAGGCATTGAGACATGCGGATTCTTCTGAGTCAGTTACTATGGAATCCTTTAACAGAAGCGCCTTTGGGGAAAATATTGATAGTCAAAGGTGGCGAACACTTCCCGGTGAAAATTCTGGGTTTTGGCCCCAAAACCAATGGGTTGCTTTTCCAACGGAATCATCCTCCTTCGCCAGAGTGGATGCATGGGTGAAAAATCTTGAGACTATGCAGCCACTACCTGAGGATGATTCTGATGATGACAATGACAGAAGCATCATCTTCCCACCTTCTCCTGATGCTGGCACATCCATGGCTAGAAGCACATCTCAGTTAACTCAACATCCTGGCGCCAATCTTTCAAAGGAGATTTTGAATGCCAATACTGTGGTCCAGTCTATAAATCCCGCTTCAACTGTTGCTCACATATCCGGTATTGGTATTAAAGCCATCCCTGCCATTTCACATTTAACCAATCTCAAATCTATCAATCTGTCAAGCAATTCCATAGTTCACATCTCTCCCGGATTTCTGCCAAAGAGTATTCATGCACTTAATTTGTCAAGAAACAAGATCAGCACCCTTGATGGTCTGAGAGAATTGAGCCGGTTGCGAGTACTTGACCTAAGTTACAACCGCATCCCAAGAGTTGGACAAGGGTTATCGAATTGTACACTAATCAAAGAGCTATATCTTGCTGGGAACAAGATAAGTGATGTTGAGGGCCTACATAGGCTACTGAAGCTAACAGTTCTTGACTTGAGCTTCAACAAGATCACTACAACAAGAGCATTAGGCCAGCTTGTGGCTAACTACAACTCACTCCAGGTCCTTAATCTGCTAGCAAATCCCATTCAAAGCAACATCAGCGATGACCAACTACGCAAAGCGGTCACTAGTCTCCTTCCAAAGTTGGTGTACTTGAACAGGCAACCTCTCGATCCTCAGAGGGCACGAGAAGTATCCGCTATTAGTGTCGCGAAAGCTGCACTTGGGAACAACAGCCGATCCAAAAGCAGAAGATCACTAAAGAAGGTTGGCAAAGGAGGGTCAAGTTCTAGCAGGGGGCATAGGAGCAGTGCAAGTGTTGTCCAGAAAAGTGTGAGCAGGACAAGGAGCAGAAATCAGAAAAGCTAG 1827 0.4444 MQKNSMCNVRVMSLESPVKAEVNDAYEGEDEKEHSLSIKREPSDFDLQGHESVVSEGGYDPTDKEVKCPILYGNQANNQLEDKNDRLSEKSVDIIQSGRVSDPGIGKTEFWASPKLKRSCSNLERRDVLREMTHHLPHSKSQSFKDLQEVLANQVGNLESPRSVMSHCSADRVLLKRHSASQVLPSGSKKLWWKLFLWSHRNIHKTFSSKSTQAVPDSAALNSQCGYHSDTLEPKHGKALRHADSSESVTMESFNRSAFGENIDSQRWRTLPGENSGFWPQNQWVAFPTESSSFARVDAWVKNLETMQPLPEDDSDDDNDRSIIFPPSPDAGTSMARSTSQLTQHPGANLSKEILNANTVVQSINPASTVAHISGIGIKAIPAISHLTNLKSINLSSNSIVHISPGFLPKSIHALNLSRNKISTLDGLRELSRLRVLDLSYNRIPRVGQGLSNCTLIKELYLAGNKISDVEGLHRLLKLTVLDLSFNKITTTRALGQLVANYNSLQVLNLLANPIQSNISDDQLRKAVTSLLPKLVYLNRQPLDPQRAREVSAISVAKAALGNNSRSKSRRSLKKVGKGGSSSSRGHRSSASVVQKSVSRTRSRNQKS* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1258 608 MobiDBLite consensus disorder prediction 21 60 - -
Dod08g1258 608 Gene3D Ribonuclease Inhibitor 449 549 IPR032675 -
Dod08g1258 608 SMART LRR_typ_2 387 409 IPR003591 -
Dod08g1258 608 SMART LRR_typ_2 431 454 IPR003591 -
Dod08g1258 608 SMART LRR_typ_2 476 498 IPR003591 -
Dod08g1258 608 ProSiteProfiles Leucine-rich repeat profile. 411 432 IPR001611 GO:0005515
Dod08g1258 608 PANTHER NISCHARIN RELATED 61 606 - -
Dod08g1258 608 ProSiteProfiles Leucine-rich repeat profile. 433 455 IPR001611 GO:0005515
Dod08g1258 608 Pfam Leucine Rich repeat 478 490 IPR001611 GO:0005515
Dod08g1258 608 SUPERFAMILY Outer arm dynein light chain 1 376 545 - -
Dod08g1258 608 SMART LRR_sd22_2 454 475 - -
Dod08g1258 608 SMART LRR_sd22_2 387 417 - -
Dod08g1258 608 SMART LRR_sd22_2 476 497 - -
Dod08g1258 608 SMART LRR_sd22_2 431 453 - -
Dod08g1258 608 MobiDBLite consensus disorder prediction 22 47 - -
Dod08g1258 608 MobiDBLite consensus disorder prediction 308 344 - -
Dod08g1258 608 PANTHER OUTER ARM DYNEIN LIGHT CHAIN 1 PROTEIN 61 606 - -
Dod08g1258 608 MobiDBLite consensus disorder prediction 562 608 - -
Dod08g1258 608 ProSiteProfiles Leucine-rich repeat profile. 456 477 IPR001611 GO:0005515
Dod08g1258 608 MobiDBLite consensus disorder prediction 576 601 - -
Dod08g1258 608 ProSiteProfiles Leucine-rich repeat profile. 478 499 IPR001611 GO:0005515
Dod08g1258 608 Gene3D Ribonuclease Inhibitor 348 448 IPR032675 -
Dod08g1258 608 Pfam Leucine rich repeat 388 444 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1258 Dod-Chr8 17702668 17706214 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1258 382 508 Receptor kinase-like Gene Family AT4G08850 34.058 2.21e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1258 - - gmx:100813969 811.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1258 08 17702668 17706214 Dod08g1258 08 17702668 17706214 ECH