Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1257 ATGTCAAGACCTCTTCAGAGAGGTGTTGTTTCAGGGGTTCGGATCCCTGATCCCAATTCCAAAGACAAAACACAAAAGGAAGATTTGGATAAAAGGGGCCCTTTACCCCTGAGGTTCCCTTTGAGCCTTATCTTTCCAGATAGTTCCCCTTCTAAATATGGCATTACTGAGAACGGCTTTGCATCTGATCAATTCATTGTTGGATCCTTGCGAAGTAGGCTCAAGTTGCTGCATTTCTTGAGGTTTAGTTTGGTGTTTATAGTTGTTCTTGCGCTCACTGGATCATTTTTGTGGACACTGTCGATTTCGACCTCATCAAGGGGTCACATTTACCATGGATATAGGAGGCTTCAAGAGAAGCTTGTATCAGACCTGTTGGATATGGGCGAGTTCACTCGCGGTACCCCGAGGGTGAAAGAGTTGGAATTCTGTTCCCAGGAGTTTGAAAACTATGTGCCCTGCTTTAATTTTACTGAGAATGTTGCTCTTGGTTATTCTGATGGCAATGAGTTTGAAAGGCAGTGTGGTCGTGAGCTCAGGCAAAGTTGTTTGGTTGTCCCGCCGGCGAATTACAAGATTCCGCTCCGGTGGCCTACTGGAAGAGATGTTATATGGGTTGCTAATGTGAAAATCACTGCACAGGAGGTTCTTTCTTCTGGAAGCTTGACCAAGAGGATGATGATGCTGGATGAAGAGCAGATTTCGTTTCGTTCGGCTTCTCTTATGTTTGATGATGTCGAAGACTACTCACATCAAATCGCGGAAATGATTGGACTTAGGAATGAATCTAACTTCATACAAGCTGGGGTTCGAACCATACTGGACATTGGTTGTGGCTATGGTAGCTTTGGAGCCCATCTCTTTCAGAGTCAACTTTTGACTATGTGCATTGCAAACTATGAGCCTTCAGGCAGTCAAGTTCAGCTTACTCTTGAGAGGGGTCTTCCTGCTATGATTGCTTCTTTCACTTCAAAACAGTTGCCATTTCCATCGCTTTCCTTTGATATGTTACATTGTGCAAGATGTGGCGTTAATTGGGACCAGAGAGATGGCATTCTCTTGATTGAAGCTGATAGACTTTTAAAACCTGGGGGATACTTTGTCTGGACATCTCCACTTGCAAATGCTCGTGACAAAGAGAATCAGAAAAAGTGGAAGTTTGTACATGACTTTGCAGCAAATATTTGCTGGGAAATGTTGTCCCAGCAAGATGAAACTGTTGTATGGAAGAAAACTAGTACAAAGAGTTGCTATAGTTCAAGAAAGACTGGTTCTGTCCCTTCTTTGTGTGGTAGAAGTCATGATGTAGAGACTCCATACTATCGAGAACTGCAAAACTGCATAGGAGGAACACAGAACAGCCATTGGATTTCAATTGAGAAAAGAGAAACATGGCCTTCTCGAGCTAACTTGAACAAGAACGAGCTTGCAATCCATGGGTTGCAGTCTGATGAATTTGCTGAGGACACTGGTAGCTGGAAAACAGCAGTCAATAATTATTGGTCACTCCTCTCACCTTTAATATTTTCTGATCATCCAAAGAGGCCTGGTGAAGAGGACCCTTCACCGCCTTACAACATGTTCAGAAATGTACTAGACATGAATGCTCAGTTTGGCGGTTTCAATTCTGCATTGTTGCAAGCTAGAAAGTCTGTCTGGGTCATGAATGTGGTTCCAATAAGTGGGCCCAACCATCTTCCCTTGATCCACGACAGAGGTTTCGTTGGCATTCTGCATGATTGGTGTGAGGCATTTCCATCATACCCTAGAACCTATGACTTGGTGCATGCAGCAGGACTCTTATCCCTCGAAACCTCCCAGCAGCGAAGATGCTCTGTCCTTGATCTGTTCATCGAAATCAACAGATTACTCCGCCCAGAGGGTTGGGTTATAATACGAGACACAGTCCCTTCAATAGAATCAGCAAGAGCTCTGACAACACAGCTGAAGTGGGATGCACGGGTGATAGAAATTGAGAGTGACAGTGATCAGAGATTGCTGATCTGCCAAAAACCGTTCTATAGTAGACAGGCAAGCTAA 2040 0.4412 MSRPLQRGVVSGVRIPDPNSKDKTQKEDLDKRGPLPLRFPLSLIFPDSSPSKYGITENGFASDQFIVGSLRSRLKLLHFLRFSLVFIVVLALTGSFLWTLSISTSSRGHIYHGYRRLQEKLVSDLLDMGEFTRGTPRVKELEFCSQEFENYVPCFNFTENVALGYSDGNEFERQCGRELRQSCLVVPPANYKIPLRWPTGRDVIWVANVKITAQEVLSSGSLTKRMMMLDEEQISFRSASLMFDDVEDYSHQIAEMIGLRNESNFIQAGVRTILDIGCGYGSFGAHLFQSQLLTMCIANYEPSGSQVQLTLERGLPAMIASFTSKQLPFPSLSFDMLHCARCGVNWDQRDGILLIEADRLLKPGGYFVWTSPLANARDKENQKKWKFVHDFAANICWEMLSQQDETVVWKKTSTKSCYSSRKTGSVPSLCGRSHDVETPYYRELQNCIGGTQNSHWISIEKRETWPSRANLNKNELAIHGLQSDEFAEDTGSWKTAVNNYWSLLSPLIFSDHPKRPGEEDPSPPYNMFRNVLDMNAQFGGFNSALLQARKSVWVMNVVPISGPNHLPLIHDRGFVGILHDWCEAFPSYPRTYDLVHAAGLLSLETSQQRRCSVLDLFIEINRLLRPEGWVIIRDTVPSIESARALTTQLKWDARVIEIESDSDQRLLICQKPFYSRQAS* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1257 679 Gene3D Vaccinia Virus protein VP39 239 428 IPR029063 -
Dod08g1257 679 MobiDBLite consensus disorder prediction 19 34 - -
Dod08g1257 679 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 268 417 IPR029063 -
Dod08g1257 679 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 24 675 IPR004159 GO:0008168
Dod08g1257 679 MobiDBLite consensus disorder prediction 1 34 - -
Dod08g1257 679 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 24 675 - -
Dod08g1257 679 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 150 671 IPR004159 GO:0008168
Dod08g1257 679 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 528 638 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1257 Dod-Chr8 17684474 17690454 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1257 K23870 - gmx:100787635 1152.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1257 08 17684474 17690454 Dod08g1257 08 17684474 17690454 ECH
Dod08g1257 08 17684474 17690454 Dod09g1288 09 34031473 34040582 PCT